Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7o3w
Q-score: 0.169
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7o3x
Q-score: 0.213
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7o3y
Q-score: 0.208
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7o40
Q-score: 0.186
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7o3z
Q-score: 0.168
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7nho
Q-score: 0.501
Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM
Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]
- Beta-carotene (536 Da, Ligand)
- Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Bicarbonate ion (61 Da, Ligand)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Psii-m (Complex from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Manganese (ii) ion (54 Da, Ligand)
- Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Fe (iii) ion (55 Da, Ligand)
- Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chloride ion (35 Da, Ligand)
- Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
Structure of PSII-I (PSII with Psb27, Psb28, and Psb34)
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7nhp
Q-score: 0.469
Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM
Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]
- Psii-i (Complex from Thermosynechococcus elongatus BP-1)
- Beta-carotene (536 Da, Ligand)
- Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem ii reaction center psb28 protein (13 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii lipoprotein psb27 (15 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Manganese (ii) ion (54 Da, Ligand)
- Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Fe (iii) ion (55 Da, Ligand)
- Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Tsl0063 protein (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chloride ion (35 Da, Ligand)
- Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
Structure of PSII-I prime (PSII with Psb28, and Psb34)
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 7nhq
Q-score: 0.465
Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM
Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]
- Beta-carotene (536 Da, Ligand)
- Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem ii reaction center psb28 protein (13 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Psii-i prime (Complex from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Manganese (ii) ion (54 Da, Ligand)
- Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Fe (iii) ion (55 Da, Ligand)
- Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Tsl0063 protein (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
- Chloride ion (35 Da, Ligand)
- Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)