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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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author:"Engel BD" AND natural_source_ncbi_code:"197221"

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EMD-12335

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Structure of PSII-M

Release date: May 5, 2021
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7nho
Q-score: 0.501

Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]

Sample:

Beta-carotene (536 Da, Ligand)
Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
Bicarbonate ion (61 Da, Ligand)
Pheophytin a (871 Da, Ligand)
Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
Psii-m (Complex from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Manganese (ii) ion (54 Da, Ligand)
Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Protoporphyrin ix containing fe (616 Da, Ligand)
Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Fe (iii) ion (55 Da, Ligand)
Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chlorophyll a (893 Da, Ligand)
Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chloride ion (35 Da, Ligand)
Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)

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EMD-12336

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Structure of PSII-I (PSII with Psb27, Psb28, and Psb34)

Release date: May 5, 2021
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7nhp
Q-score: 0.469

Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]

Sample:

Psii-i (Complex from Thermosynechococcus elongatus BP-1)
Beta-carotene (536 Da, Ligand)
Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Photosystem ii reaction center psb28 protein (13 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
Pheophytin a (871 Da, Ligand)
Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii lipoprotein psb27 (15 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Manganese (ii) ion (54 Da, Ligand)
Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Protoporphyrin ix containing fe (616 Da, Ligand)
Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Fe (iii) ion (55 Da, Ligand)
Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chlorophyll a (893 Da, Ligand)
Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
Tsl0063 protein (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chloride ion (35 Da, Ligand)
Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)

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EMD-12337

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Structure of PSII-I prime (PSII with Psb28, and Psb34)

Release date: May 5, 2021
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 7nhq
Q-score: 0.465

Zabret J, Bohn S, Schuller SK, Arnolds O, Moller M, Meier-Credo J, Liauw P, Chan A, Tajkhorshid E, Langer JD, Stoll R, Krieger-Liszkay A, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

Nat Plants (2021) 7 pp. 524-538 [ Pubmed: 33846594 DOI: doi:10.1038/s41477-021-00895-0 ]

Sample:

Beta-carotene (536 Da, Ligand)
Photosystem ii cp43 reaction center protein (50 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein m (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Photosystem ii reaction center psb28 protein (13 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii d2 protein (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
Pheophytin a (871 Da, Ligand)
Photosystem ii reaction center protein z (6 kDa, Protein from Thermosynechococcus elongatus BP-1)
Psii-i prime (Complex from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein h (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii cp47 reaction center protein (56 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein k (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Manganese (ii) ion (54 Da, Ligand)
Photosystem ii reaction center protein i (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Protoporphyrin ix containing fe (616 Da, Ligand)
Cytochrome b559 subunit alpha (9 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein ycf12 (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein l (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Fe (iii) ion (55 Da, Ligand)
Photosystem ii reaction center x protein (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chlorophyll a (893 Da, Ligand)
Cytochrome b559 subunit beta (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosystem ii reaction center protein t (3 kDa, Protein from Thermosynechococcus elongatus BP-1)
Tsl0063 protein (5 kDa, Protein from Thermosynechococcus elongatus BP-1)
Chloride ion (35 Da, Ligand)
Photosystem ii protein d1 1 (39 kDa, Protein from Thermosynechococcus elongatus BP-1)
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)

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EMD-0281

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Structure of the photosynthetic complex I from Thermosynechococcus elongatus

Release date: Jan. 9, 2019
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 6hum
Q-score: 0.482

Schuller JM, Birrell JA, Tanaka H, Konuma T, Wulfhorst H, Cox N, Schuller SK, Thiemann J, Lubitz W, Setif P, Ikegami T, Engel BD, Kurisu G, Nowaczyk MM

Science (2019) 363 pp. 257-260 [ DOI: doi:10.1126/science.aau3613 Pubmed: 30573545 ]

Sample:

Beta-carotene (536 Da, Ligand)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Nad(p)h-quinone oxidoreductase subunit j (19 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit m (12 kDa, Protein from Thermosynechococcus elongatus BP-1)
Tlr0636 protein (12 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit l (8 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit 4l (11 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nadh dehydrogenase subunit 5 (72 kDa, Protein from Thermosynechococcus elongatus BP-1)
Proton-translocating nadh-quinone dehydrogenase subunit p ndhp (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit n (16 kDa, Protein from Thermosynechococcus elongatus BP-1)
Photosynthetic complex i (Complex from Thermosynechococcus elongatus (strain BP-1))
Nad(p)h-quinone oxidoreductase subunit o (7 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit 3 (15 kDa, Protein from Thermosynechococcus elongatus BP-1)
Proton-translocating nadh-quinone dehydrogenase subunit q ndhq (4 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit i (22 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit k (25 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit 2 (55 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nadh dehydrogenase subunit 6 (21 kDa, Protein from Thermosynechococcus elongatus BP-1)
Iron/sulfur cluster (351 Da, Ligand)
Nad(p)h-quinone oxidoreductase subunit 1 (40 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase chain 4 1 (57 kDa, Protein from Thermosynechococcus elongatus BP-1)
Nad(p)h-quinone oxidoreductase subunit h (45 kDa, Protein from Thermosynechococcus elongatus BP-1)

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Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

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Field: