Cryo-EM structure of T. pseudonana PyShell helical tube
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 8wqp
Q-score: 0.64
Shimakawa G, Demulder M, Flori S, Kawamoto A, Tsuji Y, Nawaly H, Tanaka A, Tohda R, Ota T, Matsui H, Morishima N, Okubo R, Wietrzynski W, Lamm L, Righetto RD, Uwizeye C, Gallet B, Jouneau PH, Gerle C, Kurisu G, Finazzi G, Engel BD, Matsuda Y
Cell (2024) 187 pp. 5919- [ DOI: doi:10.1016/j.cell.2024.09.013 Pubmed: 39357521 ]
Tomogram of pyrenoid of T. pseudonana Shell4 knock-out
Nam O, Musial S, Demulder M, McKenzie C, Dowle A, Dowson M, Barrett J, Blaza JN, Engel BD, Mackinder LCM
Cell (2024) 187 pp. 5935-5950.e18 [ Pubmed: 39368476 DOI: doi:10.1016/j.cell.2024.09.025 ]
Subtomogram average of the T. pseudonana PyShell
Shimakawa G, Demulder M, Flori S, Kawamoto A, Tsuji Y, Nawaly H, Tanaka A, Tohda R, Ota T, Matsui H, Morishima N, Okubo R, Wietrzynski W, Lamm L, Righetto RD, Uwizeye C, Gallet B, Jouneau PH, Gerle C, Kurisu G, Finazzi G, Engel BD, Matsuda Y
Cell (2024) 187 pp. 5919-5934.e19 [ DOI: doi:10.1016/j.cell.2024.09.013 Pubmed: 39357521 ]
Tomogram #3 of the C. reinhardtii ciliary transition zone
van den Hoek H, Klena N, Jordan MA, Alvarez Viar G, Righetto RD, Schaffer M, Erdmann PS, Wan W, Geimer S, Plitzko JM, Baumeister W, Pigino G, Hamel V, Guichard P, Engel BD
Science (2022) 377 pp. 543-548 [ DOI: doi:10.1126/science.abm6704 Pubmed: 35901159 ]
In situ structure of HDCR filaments
Dietrich HM, Righetto RD, Kumar A, Wietrzynski W, Trischler R, Schuller SK, Wagner J, Schwarz FM, Engel BD, Muller V, Schuller JM
Nature (2022) 607 pp. 823-830 [ Pubmed: 35859174 DOI: doi:10.1038/s41586-022-04971-z ]
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7o3y
Q-score: 0.208
Gupta TK, Klumpe S, Gries K, Heinz S, Wietrzynski W, Ohnishi N, Niemeyer J, Spaniol B, Schaffer M, Rast A, Ostermeier M, Strauss M, Plitzko JM, Baumeister W, Rudack T, Sakamoto W, Nickelsen J, Schuller JM, Schroda M, Engel BD
Cell (2021) 184 pp. 3643- [ DOI: doi:10.1016/j.cell.2021.05.011 Pubmed: 34166613 ]
In situ cryo-electron tomogram of a pyrenoid inside a Chlamydomonas reinhardtii cell
Freeman Rosenzweig ES, Xu B, Kuhn Cuellar L, Martinez-Sanchez A, Schaffer M, Strauss M, Cartwright HN, Ronceray P, Plitzko JM, Forster F, Wingreen NS, Engel BD, Mackinder LCM, Jonikas MC
Cell (2017) 171 pp. 148-162.e19 [ Pubmed: 28938114 DOI: doi:10.1016/j.cell.2017.08.008 ]
Resolution: 2.13 Å
EM Method: Single-particle
Fitted PDBs: 7jfo
Q-score: 0.734
He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC
Nat Plants (2020) 6 pp. 1480-1490 [ DOI: doi:10.1038/s41477-020-00811-y Pubmed: 33230314 ]
- Water (18 Da, Ligand)
- Lci5 (2 kDa, Protein from Chlamydomonas reinhardtii)
- Epyc1(49-72) peptide-bound rubisco (Complex from Chlamydomonas reinhardtii)
- Ribulose bisphosphate carboxylase large chain (52 kDa, Protein from Chlamydomonas reinhardtii)
- Ribulose bisphosphate carboxylase small chain 2, chloroplastic (20 kDa, Protein from Chlamydomonas reinhardtii)
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 7jn4
Q-score: 0.624
He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC
Nat Plants (2020) 6 pp. 1480-1490 [ DOI: doi:10.1038/s41477-020-00811-y Pubmed: 33230314 ]
- Ribulose bisphosphate carboxylase large chain (52 kDa, Protein from Chlamydomonas reinhardtii)
- Water (18 Da, Ligand)
- Rubisco at apo state (Complex from Chlamydomonas reinhardtii)
- Ribulose bisphosphate carboxylase small chain 2, chloroplastic (20 kDa, Protein from Chlamydomonas reinhardtii)
EPYC1(106-135) peptide-bound Rubisco
Resolution: 2.06 Å
EM Method: Single-particle
Fitted PDBs: 7jsx
Q-score: 0.677
He S, Chou HT, Matthies D, Wunder T, Meyer MT, Atkinson N, Martinez-Sanchez A, Jeffrey PD, Port SA, Patena W, He G, Chen VK, Hughson FM, McCormick AJ, Mueller-Cajar O, Engel BD, Yu Z, Jonikas MC
Nat Plants (2020) 6 pp. 1480-1490 [ DOI: doi:10.1038/s41477-020-00811-y Pubmed: 33230314 ]
- Water (18 Da, Ligand)
- Ribulose bisphosphate carboxylase large chain (52 kDa, Protein from Chlamydomonas reinhardtii)
- Ribulose bisphosphate carboxylase small chain 2, chloroplastic (20 kDa, Protein from Chlamydomonas reinhardtii)
- Epyc1(106-135) peptide-bound rubisco (Complex from Chlamydomonas reinhardtii)
- Epyc1 (3 kDa, Protein from Chlamydomonas reinhardtii)