Cryo-EM structure of Vipp1 helical filament with lattice 1 (Vipp1_L1)
Resolution: 3.74 Å
EM Method: Helical reconstruction
Fitted PDBs: 8qbr
Q-score: 0.305
Naskar S, Merino A, Espadas J, Singh J, Roux A, Colom A, Low HH
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01401-8 Pubmed: 39528797 ]
- Vipp1_l1 (Complex from Nostoc punctiforme)
- Membrane-associated protein vipp1 (23 kDa, Protein from Nostoc punctiforme)
Cryo-EM structure of Vipp1-deltaH6_aa1-219 helical filament with lattice 2 (Vipp1-deltaH6_L2)
Resolution: 3.78 Å
EM Method: Helical reconstruction
Fitted PDBs: 8qbv
Q-score: 0.281
Naskar S, Merino A, Espadas J, Singh J, Roux A, Colom A, Low HH
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01401-8 Pubmed: 39528797 ]
- Membrane-associated protein vipp1 (24 kDa, Protein from Nostoc punctiforme)
- Vipp1-deltah6_l2 (Complex from Nostoc punctiforme)
Cryo-EM structure of Vipp1-F197K/L200K helical filament with lattice 1 (Vipp1-F197K/L200K_L1)
Naskar S, Merino A, Espadas J, Singh J, Roux A, Colom A, Low HH
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01401-8 Pubmed: 39528797 ]
- Vipp1-f197k/l200k_l1 (Complex from Nostoc punctiforme)
- Phage shock protein a, pspa (28 kDa, Protein from Nostoc punctiforme)
Cryo-EM structure of Vipp1-deltaH6_aa1-219 helical filament with lattice 3 (Vipp1-deltaH6_L3)
Naskar S, Merino A, Espadas J, Singh J, Roux A, Colom A, Low HH
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01401-8 Pubmed: 39528797 ]
- Phage shock protein a, pspa (24 kDa, Protein from Nostoc punctiforme)
- Vipp1-deltah6_l3 (Complex from Nostoc punctiforme)
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajić J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: 10.1038/s41586-024-07720-6 ]
Image sets:
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajic J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: doi:10.1038/s41586-024-07720-6 ]
Native eisosome lattice bound to plasma membrane microdomain
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8qb7
Q-score: 0.323
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajic J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: doi:10.1038/s41586-024-07720-6 ]
Resolution: 3.35 Å
EM Method: Helical reconstruction
Fitted PDBs: 8qb9
Q-score: 0.478
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajic J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: doi:10.1038/s41586-024-07720-6 ]
Resolution: 3.86 Å
EM Method: Helical reconstruction
Fitted PDBs: 8qbb
Q-score: 0.404
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajic J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: doi:10.1038/s41586-024-07720-6 ]
- Helical assembly of recombinant pil1 protein tubulating +pip2/-sterol lipid mixture (dopc,dope,dops,pi(4,5)p2 50:20:20:10) (Complex from Saccharomyces cerevisiae)
- D-myo-inositol-1,4,5-triphosphate (420 Da, Ligand)
- Sphingolipid long chain base-responsive protein pil1 (38 kDa, Protein from Saccharomyces cerevisiae)
Resolution: 3.61 Å
EM Method: Helical reconstruction
Fitted PDBs: 8qbd
Q-score: 0.428
Kefauver JM, Hakala M, Zou L, Alba J, Espadas J, Tettamanti MG, Gajic J, Gabus C, Campomanes P, Estrozi LF, Sen NE, Vanni S, Roux A, Desfosses A, Loewith R
Nature (2024) 632 pp. 664-671 [ Pubmed: 39048819 DOI: doi:10.1038/s41586-024-07720-6 ]
- D-myo-inositol-1,4,5-triphosphate (420 Da, Ligand)
- O-[(r)-{[(2r)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-l-serine (792 Da, Ligand)
- Helical assembly of recombinant pil1 protein tubulating +pip2/+sterol lipid mixture (dopc, dope, dops, cholesterol, pi(4,5)p2 35:20:20:15:10) (Complex from Saccharomyces cerevisiae)
- Sphingolipid long chain base-responsive protein pil1 (38 kDa, Protein from Saccharomyces cerevisiae)