Zophobas morio black wasting virus strain UT-morio virion structure
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8t9c
Q-score: 0.641
Penzes JJ, Holm M, Firlar E, Kaelber JT
To Be Published
- Dna (5'-d(p*cp*gp*a)-3') (886 Da, DNA from Zophobas morio)
- Dna (5'-d(p*cp*ap*gp*gp*cp*cp*ap*a)-3') (2 kDa, DNA from Zophobas morio)
- Dna (5'-d(p*cp*g)-3') (573 Da, DNA from Zophobas morio)
- Major capsid protein (65 kDa, Protein from Zophobas morio)
- Zophobas morio densovirus (Virus from Zophobas morio densovirus)
Zophobas morio black wasting virus strain OR-molitor virion structure
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8tje
Q-score: 0.529
Penzes JJ, Holm M, Firlar E, Kaelber JT
To Be Published
- Dna (5'-d(p*tp*cp*gp*ap*a)-3') (1 kDa, DNA from Tenebrio molitor)
- Dna (5'-d(p*cp*ap*gp*gp*cp*cp*ap*ap*a)-3') (2 kDa, DNA from Tenebrio molitor)
- Zophobas morio densovirus (Virus from Zophobas morio densovirus)
- Dna (5'-d(p*cp*g)-3') (573 Da, DNA from Tenebrio molitor)
- Major capsid protein (48 kDa, Protein from Tenebrio molitor)
Zophobas morio black wasting virus strain UT-morio empty capsid structure
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8t9e
Q-score: 0.618
Penzes JJ, Holm M, Firlar E, Kaelber JT
To Be Published
- Zophobas morio densovirus (Virus from Zophobas morio densovirus)
- Major capsid protein (65 kDa, Protein from Zophobas morio)
Zophobas morio black wasting virus strain OR-molitor empty capsid structure
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ta7
Q-score: 0.634
Penzes JJ, Holm M, Firlar E, Kaelber JT
To Be Published
- Zophobas morio densovirus (Virus from Zophobas morio densovirus)
- Major capsid protein (65 kDa, Protein from Tenebrio molitor)
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7rdq
Q-score: 0.516
Liu Y, Yu L, Pukhrambam C, Winkelman JT, Firlar E, Kaelber JT, Zhang Y, Nickels BE, Ebright RH
PNAS (2022) 119 [ Pubmed: 35082149 DOI: doi:10.1073/pnas.2115746119 ]
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase subunit beta (125 kDa, Protein from Thermus thermophilus HB8)
- Reiterative transcription initiation complex with 11nt oligo-g rna (425 kDa, Complex from Thermus thermophilus HB8)
- Rna polymerase sigma factor siga (48 kDa, Protein from Thermus thermophilus HB8)
- Dna-directed rna polymerase subunit beta' (170 kDa, Protein from Thermus thermophilus HB8)
- Dna-directed rna polymerase subunit omega (11 kDa, Protein from Thermus thermophilus HB8)
- Rna (5'-r(p*gp*gp*gp*gp*gp*gp*gp*gp*gp*gp*g)-3') (3 kDa, RNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- Dna (31-mer) nontemplate strand (10 kDa, DNA from synthetic construct)
- Dna-directed rna polymerase subunit alpha (35 kDa, Protein from Thermus thermophilus HB8)
- Dna (31-mer) template strand (10 kDa, DNA from synthetic construct)
Adeno-associated virus strain AAV7 capsid icosahedral structure
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7jot
Q-score: 0.658
Firlar E, Yost S, Mercer AC, Kaelber JT
To Be Published
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 7)
- Adeno-associated virus - 7 (5 MDa, Virus from Adeno-associated virus - 7)