Subtomogram average of the human Sec61-TRAP-OSTA-translocon
Resolution: 7.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8b6l
Q-score: 0.133
Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F
Nature (2023) 614 pp. 160-167 [ Pubmed: 36697828 DOI: doi:10.1038/s41586-022-05638-5 ]
- Protein transport protein sec61 subunit beta (9 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit gamma (21 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit (50 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (69 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 (4 kDa, Protein from Homo sapiens)
- Transmembrane protein 258 (9 kDa, Protein from Homo sapiens)
- Sec61-trap-osta translocon complex (Cellular component from Homo sapiens)
- Protein transport protein sec61 subunit gamma (7 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit delta (19 kDa, Protein from Homo sapiens)
- Protein transport protein sec61 subunit alpha isoform 1 (52 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a (80 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit alpha (32 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit beta (20 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 (12 kDa, Protein from Homo sapiens)
- Oligosaccharyltransferase complex subunit ostc (16 kDa, Protein from Homo sapiens)
- Signal peptide mix (1 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (68 kDa, Protein from Homo sapiens)
CryoEM Structure of Extended eEF1A bound to the Ribosome in the Classical Pre State
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8b6z
Q-score: 0.306
Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F
Nature (2023) 614 pp. 160-167 [ Pubmed: 36697828 DOI: doi:10.1038/s41586-022-05638-5 ]
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- Elongation factor 1-alpha 2 (50 kDa, Protein from Homo sapiens)
- Ribosome in the classical pre+ state (Complex from Homo sapiens)
Human Signal Peptidase Complex Paralog A (SPC-A)
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7p2p
Q-score: 0.232
Liaci AM, Steigenberger B, Telles de Souza PC, Tamara S, Grollers-Mulderij M, Ogrissek P, Marrink SJ, Scheltema RA, Forster F
Mol Cell (2021) 81 pp. 3934-3948.e11 [ DOI: doi:10.1016/j.molcel.2021.07.031 Pubmed: 34388369 ]
- Signal peptidase complex catalytic subunit a (sec11a) (Complex from Homo sapiens)
- Signal peptidase complex subunit 2 (27 kDa, Protein from Homo sapiens)
- Signal peptidase complex paralog a (spc-a) (20 kDa, Complex from Homo sapiens)
- Signal peptidase complex subunit 2 (spc25) (Complex from Homo sapiens)
- Signal peptidase complex subunit 1 (20 kDa, Protein from Homo sapiens)
- Signal peptidase complex subunit 3 (spc22/23) (Complex from Homo sapiens)
- Signal peptidase complex subunit 1 (spc12) (Complex from Homo sapiens)
- Signal peptidase complex catalytic subunit sec11a (22 kDa, Protein from Homo sapiens)
- Signal peptidase complex subunit 3 (22 kDa, Protein from Homo sapiens)
Human Signal Peptidase Complex Paralog C (SPC-C)
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7p2q
Q-score: 0.237
Liaci AM, Steigenberger B, Telles de Souza PC, Tamara S, Grollers-Mulderij M, Ogrissek P, Marrink SJ, Scheltema RA, Forster F
Mol Cell (2021) 81 pp. 3934-3948.e11 [ DOI: doi:10.1016/j.molcel.2021.07.031 Pubmed: 34388369 ]
- Signal peptidase complex catalytic subunit c (sec11c) (Complex from Homo sapiens)
- Signal peptidase complex subunit 2 (27 kDa, Protein from Homo sapiens)
- Signal peptidase complex catalytic subunit sec11c (23 kDa, Protein from Homo sapiens)
- Signal peptidase complex subunit 2 (spc25) (Complex from Homo sapiens)
- Signal peptidase complex paralog c (spc-c) (20 kDa, Complex from Homo sapiens)
- Signal peptidase complex subunit 3 (spc22/23) (Complex from Homo sapiens)
- Signal peptidase complex subunit 1 (spc12) (Complex from Homo sapiens)
- Signal peptidase complex subunit 1 (20 kDa, Protein from Homo sapiens)
- Signal peptidase complex subunit 3 (22 kDa, Protein from Homo sapiens)