S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (global refinement)
Changrob S, Halfmann PJ, Liu H, Torres JL, McGrath JJC, Ozorowski G, Li L, Wilbanks GD, Kuroda M, Maemura T, Huang M, Zheng NY, Turner HL, Erickson SA, Fu Y, Yasuhara A, Singh G, Monahan B, Mauldin J, Srivastava K, Simon V, Krammer F, Sather DN, Ward AB, Wilson IA, Kawaoka Y, Wilson PC
J Clin Inv (2023) 133 [ Pubmed: 36862518 DOI: doi:10.1172/JCI166844 ]
S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8d0z
Q-score: 0.42
Changrob S, Halfmann PJ, Liu H, Torres JL, McGrath JJC, Ozorowski G, Li L, Wilbanks GD, Kuroda M, Maemura T, Huang M, Zheng NY, Turner HL, Erickson SA, Fu Y, Yasuhara A, Singh G, Monahan B, Mauldin J, Srivastava K, Simon V, Krammer F, Sather DN, Ward AB, Wilson IA, Kawaoka Y, Wilson PC
J Clin Inv (2023) 133 [ Pubmed: 36862518 DOI: doi:10.1172/JCI166844 ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S728-1157 fab heavy chain variable region (12 kDa, Protein from Homo sapiens)
- S728-1157 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- S728-1157 igg in complex with sars-cov-2-6p-mut7 s protein (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM Structure of the Lysosomal Folliculin Complex (FLCN-FNIP2-RagA-RagC-Ragulator)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6nzd
Q-score: 0.326
Lawrence RE, Fromm SA, Fu Y, Yokom AL, Kim DJ, Thelen AM, Young LN, Lim CY, Samelson AJ, Hurley JH, Zoncu R
Science (2019) 366 pp. 971-977 [ DOI: doi:10.1126/science.aax0364 Pubmed: 31672913 ]
- Ras-related gtp-binding protein a (36 kDa, Protein from Homo sapiens)
- Ras-related gtp-binding protein c (44 kDa, Protein from Homo sapiens)
- Hepatitis b virus x interacting protein (18 kDa, Protein from Homo sapiens)
- Ragulator complex protein lamtor4 (10 kDa, Protein from Homo sapiens)
- Ragulator complex protein lamtor2 (13 kDa, Protein from Homo sapiens)
- Flcn-fnip2-raga-ragc-ragulator complex (340 kDa, Complex from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 9-{5-o-[(s)-hydroxy{[(r)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]-alpha-l-arabinofuranosyl}-3,9-dihydro-1h-purine-2,6-dione (540 Da, Ligand)
- Folliculin-interacting protein 2 (122 kDa, Protein from Homo sapiens)
- Folliculin (69 kDa, Protein from Homo sapiens)
- Ragulator complex protein lamtor3 (13 kDa, Protein from Homo sapiens)
- Ragulator complex protein lamtor1 (18 kDa, Protein from Homo sapiens)
Cryo-EM Map of the active Ragulator-RagA-RagC Complex
Lawrence RE, Fromm SA, Fu Y, Yokom AL, Kim DJ, Thelen AM, Young LN, Lim CY, Samelson AJ, Hurley JH, Zoncu R
Science (2019) 366 pp. 971-977 [ DOI: doi:10.1126/science.aax0364 Pubmed: 31672913 ]
- Active raga-ragc-ragulator complex (150 kDa, Complex from Homo sapiens)