Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Resolution: 2.34 Å
EM Method: Single-particle
Fitted PDBs: 8jt7
Q-score: 0.689
Yamaguchi H, Takahashi K, Numoto N, Suzuki H, Tatsumi M, Kamegawa A, Nishikawa K, Asano Y, Mizukoshi T, Miyano H, Fujiyoshi Y, Sugiki M
J.Biochem. (2025) 177 pp. 27-36 [ Pubmed: 39420599 DOI: doi:10.1093/jb/mvae070 ]
- Water (18 Da, Ligand)
- Flavin-adenine dinucleotide (785 Da, Ligand)
- Homooctamer of arginine oxidase (540 kDa, Complex from Pseudomonas sp.)
- Amine oxidoreductase (67 kDa, Protein from Pseudomonas sp.)
Cryo-EM structure of HCA2-Gi complex with GSK256073
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8ihb
Q-score: 0.571
Suzuki S, Tanaka K, Nishikawa K, Suzuki H, Oshima A, Fujiyoshi Y
Nat Commun (2023) 14 pp. 5899-5899 [ DOI: doi:10.1038/s41467-023-41650-7 Pubmed: 37736747 ]
- Soluble cytochrome b562,hydroxycarboxylic acid receptor 2 (74 kDa, Protein from Homo sapiens)
- 8-chloranyl-3-pentyl-7h-purine-2,6-dione (256 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Mus musculus)
- Multiprotein complex (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Mus musculus)
- Scfv16 (26 kDa, Protein from synthetic construct)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
Cryo-EM structure of HCA2-Gi complex with MK6892
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8ihf
Q-score: 0.537
Suzuki S, Tanaka K, Nishikawa K, Suzuki H, Oshima A, Fujiyoshi Y
Nat Commun (2023) 14 pp. 5899-5899 [ DOI: doi:10.1038/s41467-023-41650-7 Pubmed: 37736747 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Mus musculus)
- Soluble cytochrome b562,hydroxycarboxylic acid receptor 2 (74 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Mus musculus)
- 2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid (386 Da, Ligand)
- Multiprotein complex (Complex from Homo sapiens)
- Scfv16 (26 kDa, Protein from synthetic construct)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
Cryo-EM structure of hAQP2 in DDM
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8gcl
Q-score: 0.56
Kamegawa A, Suzuki S, Suzuki H, Nishikawa K, Numoto N, Fujiyoshi Y
J Struct Biol (2023) 215 pp. 107984-107984 [ DOI: doi:10.1016/j.jsb.2023.107984 Pubmed: 37315821 ]
- Aquaporin-2 (28 kDa, Protein from Homo sapiens)
- Tetrameter of haqp2 (Complex from Homo sapiens)