Cryo-electron tomography of GEM2-labelled Mito-EGFP in HeLa cells
Fung HKH, Hayashi Y, Salo VT, Babenko A, Zagoriy I, Brunner A, Ellenberg J, Müller CW, Cuylen-Haering S, Mahamid J
To Be Published
Image sets:
- Tilt series and alignment information for dataset 3 (220504)
- Tilt series and alignment information for dataset 5 (220720)
- Unaligned multi-frame micrographs for dataset 2 (220330)
- Reconstructed tomograms for dataset 1 (211206)
- Tilt series and alignment information for dataset 2 (220330)
- Unaligned multi-frame micrographs for dataset 1 (211206)
- Unaligned multi-frame micrographs for dataset 3 (220504)
- Reconstructed tomograms for dataset 2 (220330)
- Reconstructed tomograms for dataset 4 (220506)
- Reconstructed tomograms for dataset 3 (220504)
- Unaligned multi-frame micrographs for dataset 4 (220506)
- Unaligned multi-frame micrographs for dataset 5 (220720)
- Tilt series and alignment information for dataset 4 (220506)
- Tilt series and alignment information for dataset 1 (211206)
- Reconstructed tomograms for dataset 5 (220720)
Cryo-electron tomogram of GEM2-labelled Mito-EGFP in HeLa cells
Fung HKH, Hayashi Y, Salo VT, Babenko A, Zagoriy I, Brunner A, Ellenberg J, Muller CW, Cuylen-Haering S, Mahamid J
Nat Methods (2023) 20 pp. 1900-1908 [ DOI: doi:10.1038/s41592-023-02053-0 Pubmed: 37932397 ]
In situ subtomogram average of GEM2 particles in human cells
Fung HKH, Hayashi Y, Salo VT, Babenko A, Zagoriy I, Brunner A, Ellenberg J, Muller CW, Cuylen-Haering S, Mahamid J
Nat Methods (2023) 20 pp. 1900-1908 [ DOI: doi:10.1038/s41592-023-02053-0 Pubmed: 37932397 ]
- Cryo-focused ion beam lamellae of human cells (hela, u2os, sum159) expressing the engineered genetically encoded multimeric tag gem2 (Cell from Synechococcus elongatus PCC 7942 = FACHB-805)
- Cryo-focused ion beam lamellae of human cells (hela, u2os, sum159) expressing the engineered genetically encoded multimeric tag gem2 (Protein from Homo sapiens)
HK97 Portal Protein In situ (prohead II)
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8cez
Q-score: 0.54
Hawkins DEDP, Bayfield OW, Fung HKH, Grba DN, Huet A, Conway JF, Antson AA
Nucleic Acids Res (2023) 51 pp. 7025-7035 [ Pubmed: 37293963 DOI: doi:10.1093/nar/gkad480 ]
- Hendrixvirus (560 kDa, Virus from Hendrixvirus)
- Portal protein (47 kDa, Protein from Hendrixvirus)
HK97 Prohead II as part of a DNA packaging complex
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8cfa
Q-score: 0.557
Hawkins DEDP, Bayfield OW, Fung HKH, Grba DN, Huet A, Conway JF, Antson AA
Nucleic Acids Res (2023) 51 pp. 7025-7035 [ Pubmed: 37293963 DOI: doi:10.1093/nar/gkad480 ]
- Major capsid subunit (42 kDa, Protein from Hendrixvirus)
- Hendrixvirus (560 kDa, Virus from Hendrixvirus)
Hawkins DEDP, Bayfield OW, Fung HKH, Grba DN, Huet A, Conway JF, Antson AA
Nucleic Acids Res (2023) 51 pp. 7025-7035 [ Pubmed: 37293963 DOI: doi:10.1093/nar/gkad480 ]
- Hk97 prohead ii from packaging complex (Protein from Hendrixvirus)
- Hendrixvirus (560 kDa, Virus from Hendrixvirus)
- Hk97 packaging complex large terminase (Protein from Hendrixvirus)
- Hk97 dna packaging complex (portal) (Protein from Hendrixvirus)
HK97 portal/large terminase complex
Hawkins DEDP, Bayfield OW, Fung HKH, Grba DN, Huet A, Conway JF, Antson AA
Nucleic Acids Res (2023) 51 pp. 7025-7035 [ Pubmed: 37293963 DOI: doi:10.1093/nar/gkad480 ]
- Hendrixvirus (560 kDa, Virus from Hendrixvirus)
- Large terminase complex from hk97 (Macromolecule from Hendrixvirus)
- Portal protein from hk97 (Protein from Hendrixvirus)
HK97 large terminase packaging complex
Hawkins DEDP, Bayfield OW, Fung HKH, Grba DN, Huet A, Conway JF, Antson AA
Nucleic Acids Res (2023) 51 pp. 7025-7035 [ Pubmed: 37293963 DOI: doi:10.1093/nar/gkad480 ]
- Hendrixvirus (560 kDa, Virus from Hendrixvirus)
- Hk97 large terminase (Protein from Hendrixvirus)
Zhang X, Sridharan S, Zagoriy I, Oegema CE, Ching C, Pflaesterer T, Fung HKH, Poser I, Müller CW, Hyman AA, Savitski MM, Mahamid J
To Be Published
Image sets:
Resolution: 4.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7ozr
Q-score: 0.356
Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J
Cell (2023) 186 pp. 1877-1894.e27 [ DOI: doi:10.1016/j.cell.2023.03.015 Pubmed: 37116470 ]
- Rna (5'-r(p*up*up*up*up*up*u)-3') (1 kDa, RNA from Mumps virus genotype A)
- Nucleocapsid (61 kDa, Protein from Mumps virus genotype A)
- Authentic mumps virus nucleocapsid-rna complex (Complex from Mumps virus genotype A)