Structure of 1:1 PAPP-A.ProMBP complex(half map)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7y5n
Q-score: 0.476
Zhong Q, Chu H, Wang G, Zhang C, Li R, Guo F, Meng X, Lei X, Zhou Y, Ren R, Tao L, Li N, Gao N, Wei Y, Qiao J, Hang J
Cell Discov (2022) 8 pp. 137-137 [ Pubmed: 36550107 DOI: doi:10.1038/s41421-022-00502-2 ]
- Bone marrow proteoglycan (25 kDa, Protein from Homo sapiens)
- Structure of 1:1 papp-a/prombp complex(half map) (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Pappalysin-1 (172 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of 1:1 PAPP-A.STC2 complex(half map)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7y5q
Q-score: 0.438
Zhong Q, Chu H, Wang G, Zhang C, Li R, Guo F, Meng X, Lei X, Zhou Y, Ren R, Tao L, Li N, Gao N, Wei Y, Qiao J, Hang J
Cell Discov (2022) 8 pp. 137-137 [ Pubmed: 36550107 DOI: doi:10.1038/s41421-022-00502-2 ]
- Zinc ion (65 Da, Ligand)
- Structure of 1:1 papp-a/stc2 complex(half map) (Complex from Homo sapiens)
- Stanniocalcin-2 (33 kDa, Protein from Homo sapiens)
- Maltose/maltodextrin-binding periplasmic protein,pappalysin-1 (216 kDa, Protein from Homo sapiens)
Structure of 2:2 PAPP-A.ProMBP comple
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 8hgg
Q-score: 0.408
Zhong Q, Chu H, Wang G, Zhang C, Li R, Guo F, Meng X, Lei X, Zhou Y, Ren R, Tao L, Li N, Gao N, Wei Y, Qiao J, Hang J
Cell Discov (2022) 8 pp. 137-137 [ Pubmed: 36550107 DOI: doi:10.1038/s41421-022-00502-2 ]
- Bone marrow proteoglycan (25 kDa, Protein from Homo sapiens)
- Pappalysin-1 (181 kDa, Protein from Homo sapiens)
- Structure of 2:2 papp-a/prombp complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Structure of 2:2 PAPP-A.STC2 complex
Resolution: 4.16 Å
EM Method: Single-particle
Fitted PDBs: 8hgh
Q-score: 0.295
Zhong Q, Chu H, Wang G, Zhang C, Li R, Guo F, Meng X, Lei X, Zhou Y, Ren R, Tao L, Li N, Gao N, Wei Y, Qiao J, Hang J
Cell Discov (2022) 8 pp. 137-137 [ Pubmed: 36550107 DOI: doi:10.1038/s41421-022-00502-2 ]
- Structure of 2:2 papp-a/stc2 complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Stanniocalcin-2 (33 kDa, Protein from Homo sapiens)
- Maltose/maltodextrin-binding periplasmic protein,pappalysin-1 (216 kDa, Protein from Homo sapiens)
BD23-Fab in complex with the S ectodomain trimer
Resolution: 3.84 Å
EM Method: Single-particle
Fitted PDBs: 7byr
Q-score: 0.441
Cao Y, Su B, Guo X, Sun W, Deng Y, Bao L, Zhu Q, Zhang X, Zheng Y, Geng C, Chai X, He R, Li X, Lv Q, Zhu H, Deng W, Xu Y, Wang Y, Qiao L, Tan Y, Song L, Wang G, Du X, Gao N, Liu J, Xiao J, Su XD, Du Z, Feng Y, Qin C, Qin C, Jin R, Xie XS
Cell (2020) 182 pp. 73-84.e16 [ DOI: doi:10.1016/j.cell.2020.05.025 Pubmed: 32425270 ]
- Spike glycoprotein (138 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ab23-fab-heavy chain (13 kDa, Protein from Homo sapiens)
- Ab23-fab-light chain (11 kDa, Protein from Homo sapiens)
- Ab23-fab (Complex from Homo sapiens)
- Sars-cov-2 spike glycoprotein (Complex from SARS coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Bd23-fab in complex with the s ectodomain trimer (Complex)
Cryo-EM structure of human secretory immunoglobulin A
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 6lx3
Q-score: 0.545
Wang Y, Wang G, Li Y, Zhu Q, Shen H, Gao N, Xiao J
Cell Res (2020) 30 pp. 602-609 [ DOI: doi:10.1038/s41422-020-0336-3 Pubmed: 32398862 ]
- Immunoglobulin j chain (19 kDa, Protein from Homo sapiens)
- Interleukin-2,immunoglobulin heavy constant alpha 1 (31 kDa, Protein from Homo sapiens)
- Ternary complex of iga-fc with the j chain and pigr/sc (Complex from Homo sapiens)
- Polymeric immunoglobulin receptor (63 kDa, Protein from Homo sapiens)
Cryo-EM structure of human secretory immunoglobulin A in complex with the N-terminal domain of SpsA
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 6lxw
Q-score: 0.513
Wang Y, Wang G, Li Y, Zhu Q, Shen H, Gao N, Xiao J
Cell Res (2020) 30 pp. 602-609 [ DOI: doi:10.1038/s41422-020-0336-3 Pubmed: 32398862 ]
- Immunoglobulin j chain (19 kDa, Protein from Homo sapiens)
- Siga binding protein (36 kDa, Protein from Streptococcus pneumoniae)
- Quadruple complex of human secretory immunoglobulin a with the n-terminal domain of spsa (Complex from Homo sapiens)
- Interleukin-2,immunoglobulin heavy constant alpha 1 (31 kDa, Protein from Homo sapiens)
- Polymeric immunoglobulin receptor (63 kDa, Protein from Homo sapiens)
Cryo-EM structure of human IgM-Fc in complex with the J chain and the ectodomain of pIgR
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6kxs
Q-score: 0.457
Li Y, Wang G, Li N, Wang Y, Zhu Q, Chu H, Wu W, Tan Y, Yu F, Su XD, Gao N, Xiao J
Science (2020) 367 pp. 1014-1017 [ Pubmed: 32029689 DOI: doi:10.1126/science.aaz5425 ]
- Ternary complex of igm-fc with the j chain and pigr/sc (Complex from Homo sapiens)
- Polymeric immunoglobulin receptor (61 kDa, Protein from Homo sapiens)
- Immunoglobulin j chain (15 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin heavy constant mu (41 kDa, Protein from Homo sapiens)
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 6k61
Q-score: 0.65
Zheng L, Li Y, Li X, Zhong Q, Li N, Zhang K, Zhang Y, Chu H, Ma C, Li G, Zhao J, Gao N
Nat Plants (2019) 5 pp. 1087-1097 [ Pubmed: 31595062 DOI: doi:10.1038/s41477-019-0525-6 ]
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit ix (5 kDa, Protein from Nostoc sp. PCC 7120)
- Beta-carotene (536 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 1 (83 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i 4.8 kda protein (4 kDa, Protein from Nostoc sp. PCC 7120)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit psak 1 (8 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit viii (5 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit iii (17 kDa, Protein from Nostoc sp. PCC 7120)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Nostoc sp. PCC 7120)
- Photosystem i complex of cyanobacterium anabaena sp. pcc 7120 (1 MDa, Cellular component from Nostoc sp. PCC 7120)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit xi (18 kDa, Protein from Nostoc sp. PCC 7120)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem i iron-sulfur center (8 kDa, Protein from Nostoc sp. PCC 7120)
- Chlorophyll a isomer (893 Da, Ligand)
State 1 of cryo-EM structure of the yeast pre-60S particles isolated with Nog2-TAP
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 3jct
Q-score: 0.468
Wu S, Tutunchuoglu B, Yan K, Brown H, Zhang YX, Tan D, Gamalinda M, Yuan Y, Li ZF, Jakovljevic J, Ma CY, Lei JL, Dong M-Q, Woolford J, Gao N
Nature (2016) 534 pp. 133-137 [ Pubmed: 27251291 DOI: doi:10.1038/nature17942 ]