Structure of monkeypox virus polymerase complex F8-A22-E4-H5 (tag-free A22) with exogenous DNA
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8wpe
Q-score: 0.47
Mol Cell (2023) 83 pp. 4398- [ Pubmed: 37995690 DOI: doi:10.1016/j.molcel.2023.10.038 ]
- H5r late gene transcription factor (23 kDa, Protein from Monkeypox virus)
- Dna (Complex)
- Primer dna (10 kDa, DNA from synthetic construct)
- Dna polymerase (117 kDa, Protein from Monkeypox virus)
- A22r dna polymerase processivity factor (49 kDa, Protein from Monkeypox virus)
- Template dna (14 kDa, DNA from synthetic construct)
- F8-a22-e4-h5 (Complex)
- E4r uracil-dna glycosylase, dna polymerase processivity factor (25 kDa, Protein from Monkeypox virus)
- 2',3'-dideoxy-thymidine-5'-triphosphate (466 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- F8-a22-e4-h5 (tag-free a22) with exogenous dna (Complex from Monkeypox virus)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8wpf
Q-score: 0.448
Mol Cell (2023) 83 pp. 4398- [ Pubmed: 37995690 DOI: doi:10.1016/j.molcel.2023.10.038 ]
- H5r late gene transcription factor (23 kDa, Protein from Monkeypox virus)
- Dna (Complex)
- Primer dna (10 kDa, DNA from synthetic construct)
- A22r dna polymerase processivity factor (50 kDa, Protein from Monkeypox virus)
- F8-a22-e4-h5 (Complex)
- E4r uracil-dna glycosylase, dna polymerase processivity factor (25 kDa, Protein from Monkeypox virus)
- 2',3'-dideoxy-thymidine-5'-triphosphate (466 Da, Ligand)
- Template dna (14 kDa, DNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- F8-a22-e4-h5 with exogenous dna bearing one abasic site (Complex from Monkeypox virus)
- Dna polymerase (117 kDa, Protein from Monkeypox virus)
Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with exgenous DNA
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8wpk
Q-score: 0.512
Mol Cell (2023) 83 pp. 4398- [ Pubmed: 37995690 DOI: doi:10.1016/j.molcel.2023.10.038 ]
- H5r late gene transcription factor (23 kDa, Protein from Monkeypox virus)
- F8-a22-e4-h5 with exogenous dna (Complex)
- Primer dna (10 kDa, DNA from synthetic construct)
- F8-a22-e4-h5 (Complex from Monkeypox virus)
- Template dna (14 kDa, DNA from synthetic construct)
- E4r uracil-dna glycosylase, dna polymerase processivity factor (25 kDa, Protein from Monkeypox virus)
- 2',3'-dideoxy-thymidine-5'-triphosphate (466 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dna (Complex from Homo sapiens)
- Dna polymerase (117 kDa, Protein from Monkeypox virus)
- Dna polymerase processivity factor (50 kDa, Protein from Monkeypox virus)
Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with endogenous DNA
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8wpp
Q-score: 0.41
Mol Cell (2023) 83 pp. 4398- [ Pubmed: 37995690 DOI: doi:10.1016/j.molcel.2023.10.038 ]
- H5r late gene transcription factor (23 kDa, Protein from Monkeypox virus)
- Template dna (14 kDa, DNA from Homo sapiens)
- Dna polymerase (117 kDa, Protein from Monkeypox virus)
- Primer dna (10 kDa, DNA from Homo sapiens)
- F8-a22-e4-h5 (Complex from Monkeypox virus)
- A22r dna polymerase processivity factor (50 kDa, Protein from Monkeypox virus)
- E4r uracil-dna glycosylase, dna polymerase processivity factor (25 kDa, Protein from Monkeypox virus)
- Dna (Complex from Homo sapiens)
- F8-a22-e4-h5 with endogenous dna (Complex)
Mol Cell (2023) 83 pp. 4398-4412.e4 [ Pubmed: 37995690 DOI: doi:10.1016/j.molcel.2023.10.038 ]
Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Resolution: 15.5 Å
EM Method: Single-particle
Fitted PDBs: 1zn0, 1zn1
Q-score: -0.009
Gao N, Zavialov AV, Li W, Sengupta J, Valle M, Gursky RP, Ehrenberg M, Frank J
Mol Cell (2005) 18 pp. 663-674 [ DOI: doi:10.1016/j.molcel.2005.05.005 Pubmed: 15949441 ]
- 50s.ef-g.gdpnp.rrf complex from e.coli (Sample)
- Rrf (Protein from Escherichia coli)
- 50s subunit (Complex from Escherichia coli)
- Ef-g (Protein from Escherichia coli)
Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Resolution: 14.1 Å
EM Method: Single-particle
Fitted PDBs: 1zn0, 1zn1
Q-score: 0.0285
Gao N, Zavialov AV, Li W, Sengupta J, Valle M, Gursky RP, Ehrenberg M, Frank J
Mol Cell (2005) 18 pp. 663-674 [ DOI: doi:10.1016/j.molcel.2005.05.005 Pubmed: 15949441 ]
- Rrf (Protein)
- Mrna (Macromolecule)
- 70s.trna-ile.mrna.puromycin.rrf from e.coli ribosome (Sample)
- Trna-ile (RNA from Escherichia coli)
- 70s (Complex)