Cryo-EM structure of CpcL-PBS from cyanobacterium Synechocystis sp. PCC 6803
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8hfq
Q-score: 0.621
Zheng L, Zhang Z, Wang H, Zheng Z, Wang J, Liu H, Chen H, Dong C, Wang G, Weng Y, Gao N, Zhao J
Nat Commun (2023) 14 pp. 3961-3961 [ Pubmed: 37407580 DOI: doi:10.1038/s41467-023-39689-7 ]
- Photosystem i-associated linker protein cpcl (28 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- C-phycocyanin alpha subunit (17 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Ferredoxin--nadp reductase (46 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Phycobilisome 32.1 kda linker polypeptide, phycocyanin-associated, rod 2 (30 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Phycobilisome 32.1 kda linker polypeptide, phycocyanin-associated, rod 1 (32 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- C-phycocyanin beta subunit (18 kDa, Protein from Synechocystis sp. (strain PCC 6803 / Kazusa))
- Cryo-em structure of cpcl-pbs from cyanobacterium synechocystis sp. pcc 6803 (Complex from Synechocystis sp. PCC 6803)
- Phycocyanobilin (588 Da, Ligand)
Cryo-EM structure of endogenous 80S-RAC complex from S. cerevisiae
Nat Commun (2022) 13 pp. 3410-3410 [ DOI: doi:10.1038/s41467-022-31127-4 Pubmed: 35701497 ]
Cryo-EM structure of RNC-RAC complex in presence of Ssb from S. cerevisiae 1
Nat Commun (2022) 13 pp. 3410-3410 [ DOI: doi:10.1038/s41467-022-31127-4 Pubmed: 35701497 ]
Cryo-EM structure of RNC-RAC complex in presence of Ssb from S. cerevisiae 2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7x34
Q-score: 0.285
Nat Commun (2022) 13 pp. 3410-3410 [ DOI: doi:10.1038/s41467-022-31127-4 Pubmed: 35701497 ]
- Zuotin (10 kDa, Protein from Saccharomyces cerevisiae)
- Rnc-rac complex in presence of ssb from s. cerevisiae 2 (Complex from Saccharomyces cerevisiae)
- Rna (130-mer) (42 kDa, RNA from Saccharomyces cerevisiae)
Cryo-EM structure of RNC-RAC complex (State C2)
Nat Commun (2022) 13 pp. 3410-3410 [ DOI: doi:10.1038/s41467-022-31127-4 Pubmed: 35701497 ]
Cryo-EM structure of RAC in the State C2 RNC-RAC complex
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 7x3k
Q-score: 0.259
Nat Commun (2022) 13 pp. 3410-3410 [ DOI: doi:10.1038/s41467-022-31127-4 Pubmed: 35701497 ]
- Zuotin (49 kDa, Protein from Saccharomyces cerevisiae)
- Rac in the state c2 rnc-rac complex (Complex from Saccharomyces cerevisiae)
- Ribosome-associated complex subunit ssz1 (58 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of MCM double hexamer with structured Mcm4-NSD
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7v3u
Q-score: 0.514
Cheng J, Li N, Huo Y, Dang S, Tye BK, Gao N, Zhai Y
Nat Commun (2022) 13 pp. 1396-1396 [ Pubmed: 35296675 DOI: doi:10.1038/s41467-022-29070-5 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna replication licensing factor mcm3 (107 kDa, Protein from Saccharomyces cerevisiae S288C)
- Mcm double hexamer (dh) (Complex from Saccharomyces cerevisiae S288c)
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae S288C)
- Magnesium ion (24 Da, Ligand)
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of MCM double hexamer bound with DDK in State I
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7v3v
Q-score: 0.477
Cheng J, Li N, Huo Y, Dang S, Tye BK, Gao N, Zhai Y
Nat Commun (2022) 13 pp. 1396-1396 [ Pubmed: 35296675 DOI: doi:10.1038/s41467-022-29070-5 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna replication licensing factor mcm3 (107 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cell division control protein 7 (58 kDa, Protein from Saccharomyces cerevisiae S288C)
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae S288C)
- Magnesium ion (24 Da, Ligand)
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dh-ddk (state i) (Complex from Saccharomyces cerevisiae S288c)
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ddk kinase regulatory subunit dbf4 (80 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM map of Dbf4-NTD engaged with Mcm2-NTD-A subtracted from DH-DDK complex