Photochromobilin-free form of Arabidopsis thaliana phytochrome A - apo-AtphyA
Pr conformer of Arabidopsis thaliana phytochrome A - AtphyA-Pr
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8isj
Q-score: 0.43
Zhang Y, Lin X, Ma C, Zhao J, Shang X, Wang Z, Xu B, Gao N, Deng XW, Wang J
Cell Res (2023) 33 pp. 806-809 [ DOI: doi:10.1038/s41422-023-00858-4 Pubmed: 37491602 ]
- 3-[5-[[(3~{r},4~{r})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{h}-pyrrol-2-yl]methyl]-4-methyl-1~{h}-pyrrol-3-yl]propanoic acid (586 Da, Ligand)
- Pr conformer of arabidopsis thaliana phytochrome a - atphya-pr (Complex from Arabidopsis thaliana)
- Phytochrome a (124 kDa, Protein from Arabidopsis thaliana)
Pr conformer of Zea mays phytochrome A1 - ZmphyA1-Pr
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8isk
Q-score: 0.415
Zhang Y, Lin X, Ma C, Zhao J, Shang X, Wang Z, Xu B, Gao N, Deng XW, Wang J
Cell Res (2023) 33 pp. 806-809 [ Pubmed: 37491602 DOI: doi:10.1038/s41422-023-00858-4 ]
- 3-[5-[[(3~{r},4~{r})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{h}-pyrrol-2-yl]methyl]-4-methyl-1~{h}-pyrrol-3-yl]propanoic acid (586 Da, Ligand)
- Phytochrome (124 kDa, Protein from Zea mays)
- Zea mays phytochrome a1 (zmphya1-pr) (Complex from Arabidopsis thaliana)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6j5u
Q-score: 0.365
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ Pubmed: 30948526 DOI: doi:10.1126/science.aav5868 ]
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Probable serine/threonine-protein kinase pbl2 (46 kDa, Protein from Arabidopsis thaliana)
- Uridine-5'-monophosphate (324 Da, Ligand)
- Protein kinase superfamily protein (40 kDa, Protein from Arabidopsis thaliana)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 6j5v
Q-score: 0.354
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ Pubmed: 30948526 DOI: doi:10.1126/science.aav5868 ]
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Probable serine/threonine-protein kinase pbl2 (46 kDa, Protein from Arabidopsis thaliana)
- Uridine-5'-monophosphate (324 Da, Ligand)
- Protein kinase superfamily protein (40 kDa, Protein from Arabidopsis thaliana)
Ligand-triggered allosteric ADP release primes a plant NLR complex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6j5w
Q-score: 0.452
Wang J, Wang J, Hu M, Wu S, Qi J, Wang G, Han Z, Qi Y, Gao N, Wang HW, Zhou JM, Chai J
Science (2019) 364 [ Pubmed: 30948526 DOI: doi:10.1126/science.aav5868 ]
- Rks1 (40 kDa, Protein from Arabidopsis thaliana)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Disease resistance rpp13-like protein 4 (97 kDa, Protein from Arabidopsis thaliana)
- Zar1-rks1 with adp complex (130 kDa, Complex from Arabidopsis)