Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8ptx
Q-score: 0.441
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- 5'-deoxyadenosine (251 Da, Ligand)
- Acetyl coenzyme *a (809 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Trna gln (24 kDa, RNA from Homo sapiens)
- Human elp123 in complex with glutamine trna, acetyl-coa, 5'-deoxyadenosine and methionine (635 kDa, Complex from Homo sapiens)
Cryo-EM structure of human Elp123 in complex with 5'-deoxyadenosine and methionine
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 8pty
Q-score: 0.487
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Human elp123 in complex with 5'-deoxyadenosine and methionine (610 kDa, Complex from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 8ptz
Q-score: 0.386
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- S-ethyl-coa (795 Da, Ligand)
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Human elp123 in complex with glutamine trna, s-ethyl-coa, 5'-deoxyadenosine and methionine (635 kDa, Complex from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Trna gln (24 kDa, RNA from Homo sapiens)
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 8pu0
Q-score: 0.277
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- Human elp123 in complex with glutamine trna, desulpho-coa, 5'-deoxyadenosine and methionine (635 kDa, Complex from Homo sapiens)
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Desulfo-coenzyme a (735 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Trna gln (24 kDa, RNA from Homo sapiens)
Human elongator Elp456 subcomplex
Gaik M, Kojic M, Stegeman MR, Oncu-Oner T, Koscielniak A, Jones A, Mohamed A, Chau PYS, Sharmin S, Chramiec-Glabik A, Indyka P, Rawski M, Biela A, Dobosz D, Millar A, Chau V, Unalp A, Piper M, Bellingham MC, Eichler EE, Nickerson DA, Guleryuz H, Abbassi NEH, Jazgar K, Davis MJ, Mercimek-Andrews S, Cingoz S, Wainwright BJ, Glatt S
Embo Mol Med (2022) 14 pp. e15608-e15608 [ Pubmed: 35698786 DOI: doi:10.15252/emmm.202115608 ]
- Elp4, elp5, elp6 (200 kDa, Complex from Homo sapiens)
Murine Elongator Elp456 subcomplex
Gaik M, Kojic M, Stegeman MR, Oncu-Oner T, Koscielniak A, Jones A, Mohamed A, Chau PYS, Sharmin S, Chramiec-Glabik A, Indyka P, Rawski M, Biela A, Dobosz D, Millar A, Chau V, Unalp A, Piper M, Bellingham MC, Eichler EE, Nickerson DA, Guleryuz H, Abbassi NEH, Jazgar K, Davis MJ, Mercimek-Andrews S, Cingoz S, Wainwright BJ, Glatt S
Embo Mol Med (2022) 14 pp. e15608-e15608 [ Pubmed: 35698786 DOI: doi:10.15252/emmm.202115608 ]
- Elp4, elp5, elp6 (200 kDa, Complex from Mus musculus)