Cryo-EM structure of human Elp123 in complex with 5'-deoxyadenosine and methionine
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 8pty
Q-score: 0.487
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Human elp123 in complex with 5'-deoxyadenosine and methionine (610 kDa, Complex from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 8pu0
Q-score: 0.277
Abbassi NE, Jaciuk M, Scherf D, Bohnert P, Rau A, Hammermeister A, Rawski M, Indyka P, Wazny G, Chramiec-Glabik A, Dobosz D, Skupien-Rabian B, Jankowska U, Rappsilber J, Schaffrath R, Lin TY, Glatt S
Nat Commun (2024) 15 pp. 4094-4094 [ Pubmed: 38750017 DOI: doi:10.1038/s41467-024-48251-y ]
- Elongator complex protein 2 (92 kDa, Protein from Homo sapiens)
- Human elp123 in complex with glutamine trna, desulpho-coa, 5'-deoxyadenosine and methionine (635 kDa, Complex from Homo sapiens)
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 1 (150 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- Desulfo-coenzyme a (735 Da, Ligand)
- Elongator complex protein 3 (65 kDa, Protein from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Trna gln (24 kDa, RNA from Homo sapiens)
Cryo-EM structure of yeast Elongator complex
Resolution: 4.35 Å
EM Method: Single-particle
Fitted PDBs: 8asv
Q-score: 0.372
Jaciuk M, Scherf D, Kaszuba K, Gaik M, Rau A, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Graziadei A, Chramiec-Glabik A, Biela A, Dobosz D, Lin TY, Abbassi NE, Hammermeister A, Rappsilber J, Kosinski J, Schaffrath R, Glatt S
Nucleic Acids Res (2023) 51 pp. 2011-2032 [ DOI: doi:10.1093/nar/gkac1232 Pubmed: 36617428 ]
- Elongator complex protein 3 (63 kDa, Protein from Saccharomyces cerevisiae)
- Elongator complex protein 5 (35 kDa, Protein from Saccharomyces cerevisiae)
- Elongator complex protein 6 (30 kDa, Protein from Saccharomyces cerevisiae)
- Elongator complex protein 1 (153 kDa, Protein from Saccharomyces cerevisiae)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 2 (89 kDa, Protein from Saccharomyces cerevisiae)
- Yeast elongator complex (845 kDa, Complex from Saccharomyces cerevisiae)
- Elongator complex protein 4 (51 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of yeast Elp123 in complex with alanine tRNA
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8asw
Q-score: 0.403
Jaciuk M, Scherf D, Kaszuba K, Gaik M, Rau A, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Graziadei A, Chramiec-Glabik A, Biela A, Dobosz D, Lin TY, Abbassi NE, Hammermeister A, Rappsilber J, Kosinski J, Schaffrath R, Glatt S
Nucleic Acids Res (2023) 51 pp. 2011-2032 [ DOI: doi:10.1093/nar/gkac1232 Pubmed: 36617428 ]
- 5'-deoxyadenosine (251 Da, Ligand)
- Yeast elp123 in complex with alanine trna (636 kDa, Complex from Saccharomyces cerevisiae)
- Elongator complex protein 1 (153 kDa, Protein from Saccharomyces cerevisiae)
- Iron/sulfur cluster (351 Da, Ligand)
- Elongator complex protein 2 (89 kDa, Protein from Saccharomyces cerevisiae)
- Elongator complex protein 3 (63 kDa, Protein from Saccharomyces cerevisiae)
- Alanine trna (23 kDa, RNA from Saccharomyces cerevisiae)
Cryo-EM structure of mouse Elongator complex
Jaciuk M, Scherf D, Kaszuba K, Gaik M, Rau A, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Graziadei A, Chramiec-Glabik A, Biela A, Dobosz D, Lin TY, Abbassi NE, Hammermeister A, Rappsilber J, Kosinski J, Schaffrath R, Glatt S
Nucleic Acids Res (2023) 51 pp. 2011-2032 [ DOI: doi:10.1093/nar/gkac1232 Pubmed: 36617428 ]
- Elongator complex protein 5 (Protein from Mus musculus)
- Elongator complex protein 2 (Protein from Mus musculus)
- Elongator complex protein 1 (Protein from Mus musculus)
- Elongator complex protein 4 (Protein from Mus musculus)
- Mouse elongator complex (828 kDa, Complex from Saccharomyces cerevisiae)
- Elongator complex protein 3 (Protein from Mus musculus)
- Elongator complex protein 6 (Protein from Mus musculus)
Cryo-EM structure of yeast Elp456 subcomplex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8at6
Q-score: 0.456
Jaciuk M, Scherf D, Kaszuba K, Gaik M, Rau A, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Graziadei A, Chramiec-Glabik A, Biela A, Dobosz D, Lin TY, Abbassi NE, Hammermeister A, Rappsilber J, Kosinski J, Schaffrath R, Glatt S
Nucleic Acids Res (2023) 51 pp. 2011-2032 [ DOI: doi:10.1093/nar/gkac1232 Pubmed: 36617428 ]
- Elongator complex protein 6 (30 kDa, Protein from Saccharomyces cerevisiae)
- Elongator complex protein 5 (35 kDa, Protein from Saccharomyces cerevisiae)
- Yeast elp456 subcomplex (233 kDa, Complex from Saccharomyces cerevisiae)
- Elongator complex protein 4 (51 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of mouse Elp123 with bound SAM
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 8avg
Q-score: 0.423
Jaciuk M, Scherf D, Kaszuba K, Gaik M, Rau A, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Graziadei A, Chramiec-Glabik A, Biela A, Dobosz D, Lin TY, Abbassi NE, Hammermeister A, Rappsilber J, Kosinski J, Schaffrath R, Glatt S
Nucleic Acids Res (2023) 51 pp. 2011-2032 [ DOI: doi:10.1093/nar/gkac1232 Pubmed: 36617428 ]
- Elongator complex protein 3 (62 kDa, Protein from Mus musculus)
- Mouse elp123 with bound sam (610 kDa, Complex from Mus musculus)
- Elongator complex protein 1 (149 kDa, Protein from Mus musculus)
- Iron/sulfur cluster (351 Da, Ligand)
- S-adenosylmethionine (398 Da, Ligand)
- Elongator complex protein 2 (93 kDa, Protein from Mus musculus)
Human elongator Elp456 subcomplex
Gaik M, Kojic M, Stegeman MR, Oncu-Oner T, Koscielniak A, Jones A, Mohamed A, Chau PYS, Sharmin S, Chramiec-Glabik A, Indyka P, Rawski M, Biela A, Dobosz D, Millar A, Chau V, Unalp A, Piper M, Bellingham MC, Eichler EE, Nickerson DA, Guleryuz H, Abbassi NEH, Jazgar K, Davis MJ, Mercimek-Andrews S, Cingoz S, Wainwright BJ, Glatt S
Embo Mol Med (2022) 14 pp. e15608-e15608 [ Pubmed: 35698786 DOI: doi:10.15252/emmm.202115608 ]
- Elp4, elp5, elp6 (200 kDa, Complex from Homo sapiens)
Murine Elongator Elp456 subcomplex
Gaik M, Kojic M, Stegeman MR, Oncu-Oner T, Koscielniak A, Jones A, Mohamed A, Chau PYS, Sharmin S, Chramiec-Glabik A, Indyka P, Rawski M, Biela A, Dobosz D, Millar A, Chau V, Unalp A, Piper M, Bellingham MC, Eichler EE, Nickerson DA, Guleryuz H, Abbassi NEH, Jazgar K, Davis MJ, Mercimek-Andrews S, Cingoz S, Wainwright BJ, Glatt S
Embo Mol Med (2022) 14 pp. e15608-e15608 [ Pubmed: 35698786 DOI: doi:10.15252/emmm.202115608 ]
- Elp4, elp5, elp6 (200 kDa, Complex from Mus musculus)
Elongator catalytic subcomplex Elp123 lobe
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6qk7
Q-score: 0.416
Dauden MI, Jaciuk M, Weis F, Lin TY, Kleindienst C, Abbassi NEH, Khatter H, Krutyholowa R, Breunig KD, Kosinski J, Muller CW, Glatt S
Sci Adv (2019) 5 pp. eaaw2326-eaaw2326 [ Pubmed: 31309145 DOI: doi:10.1126/sciadv.aaw2326 ]
- Elongator complex protein 3 (63 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Elongator complex protein 1 (153 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 5'-deoxyadenosine (251 Da, Ligand)
- Elongator complex protein 2 (89 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Elongator catalytic subcomplex elp123 (621 kDa, Complex from Saccharomyces cerevisiae)
- Iron/sulfur cluster (351 Da, Ligand)