Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8qma
Q-score: 0.461
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910- [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
- Dna-directed rna polymerase subunit beta'' (156 kDa, Protein from Sinapis alba)
- Fln2 (68 kDa, Protein from Sinapis alba)
- Pap5 (60 kDa, Protein from Sinapis alba)
- Plastid-encoded dna-dependent rna polymerase (pep) (1 MDa, Complex from Sinapis alba)
- Pap9 (34 kDa, Protein from Sinapis alba)
- Pap4 (30 kDa, Protein from Sinapis alba)
- Dna-directed rna polymerase subunit beta (121 kDa, Protein from Sinapis alba)
- Pap3 (79 kDa, Protein from Sinapis alba)
- Fe (iii) ion (55 Da, Ligand)
- Dna-directed rna polymerase subunit beta' (78 kDa, Protein from Sinapis alba)
- Pap1 (103 kDa, Protein from Sinapis alba)
- Pap6 (52 kDa, Protein from Sinapis alba)
- Ptac18 (16 kDa, Protein from Sinapis alba)
- Pap10 (20 kDa, Protein from Sinapis alba)
- Zinc ion (65 Da, Ligand)
- Pap12 (dna-directed rna polymerase subunit omega) (18 kDa, Protein from Sinapis alba)
- Dna-directed rna polymerase subunit alpha (37 kDa, Protein from Sinapis alba)
- S-adenosylmethionine (398 Da, Ligand)
- Pap7 (55 kDa, Protein from Sinapis alba)
- Pap11 (85 kDa, Protein from Sinapis alba)
- Pap8 (38 kDa, Protein from Sinapis alba)
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map A
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map B.
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map C
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map D
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba.- Map E
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map F
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ Pubmed: 38428434 DOI: doi:10.1016/j.molcel.2024.02.003 ]
Structure of the core Vaccinia Virus DNA-dependent RNA polymerase complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6ric
Q-score: 0.562
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
Cell (2019) 179 pp. 1525- [ Pubmed: 31835031 DOI: doi:10.1016/j.cell.2019.11.023 ]
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus GLV-1h68)
- Zinc ion (65 Da, Ligand)
- Dna-dependent rna polymerase subunit rpo18 (17 kDa, Protein from Vaccinia virus GLV-1h68)
- Rap94 transcription factor (93 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-directed rna polymerase subunit (21 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus GLV-1h68)
- Core vaccinia dna-dependent rna polymerase complex (500 kDa, Complex)
- Dna-dependent rna polymerase subunit rpo147 (146 kDa, Protein from Vaccinia virus GLV-1h68)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunit rpo132 (133 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunits (Complex from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunit rpo7 (7 kDa, Protein from Vaccinia virus GLV-1h68)
Structure of Vaccinia Virus DNA-dependent RNA polymerase elongation complex
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6rid
Q-score: 0.579
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
Cell (2019) 179 pp. 1525- [ Pubmed: 31835031 DOI: doi:10.1016/j.cell.2019.11.023 ]
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus GLV-1h68)
- Zinc ion (65 Da, Ligand)
- Dna-dependent rna polymerase subunit rpo18 (17 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunit rpo132 (Complex from Vaccinia virus GLV-1h68)
- Dna-directed rna polymerase subunit (21 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-directed rna polymerase subunits (Complex from Vaccinia virus GLV-1h68)
- Vaccinia virus dna-dependent rna polymerase elongation complex (450 kDa, Complex)
- Template strand dna (14 kDa, DNA from Vaccinia virus)
- Rna (9 kDa, RNA from Vaccinia virus)
- Dna-dependent rna polymerase subunit rpo147 (146 kDa, Protein from Vaccinia virus GLV-1h68)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus GLV-1h68)
- Non-template strand dna (14 kDa, DNA from Vaccinia virus)
- Nucleic acids (Complex from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunit rpo7 (7 kDa, Protein from Vaccinia virus GLV-1h68)
- Dna-dependent rna polymerase subunit rpo132 (133 kDa, Protein from Vaccinia virus GLV-1h68)
Structure of Vaccinia Virus DNA-dependent RNA polymerase co-transcriptional capping complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6rie
Q-score: 0.558
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
Cell (2019) 179 pp. 1525- [ Pubmed: 31835031 DOI: doi:10.1016/j.cell.2019.11.023 ]
- Dna-dependent rna polymerase subunit rpo18 (17 kDa, Protein from Vaccinia virus)
- Rna (Complex from Vaccinia virus)
- Vaccinia virus dna-dependent rna polymerase co-transcriptional capping complex (580 kDa, Complex)
- Rna (9 kDa, RNA from Vaccinia virus)
- Dna-dependent rna polymerase subunit rpo132 (133 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 35 kda subunit (35 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 30 kda polypeptide (29 kDa, Protein from Vaccinia virus)
- Dna-dependent rna polymerase subunit rpo7 (7 kDa, Protein from Vaccinia virus)
- Small subunit of mrna capping enzyme (33 kDa, Protein from Vaccinia virus)
- Synthetic (Complex from Vaccinia virus)
- Dna-directed rna polymerase subunit (21 kDa, Protein from Vaccinia virus)
- Large subunit of mrna capping enzyme (96 kDa, Protein from Vaccinia virus)
- Dna-directed rna polymerase 19 kda subunit (19 kDa, Protein from Vaccinia virus)
- Magnesium ion (24 Da, Ligand)
- Non-template dna strand (14 kDa, DNA from Vaccinia virus)
- Zinc ion (65 Da, Ligand)
- Dna-dependent rna polymerase subunit rpo147 (146 kDa, Protein from Vaccinia virus)
- Template strand dna (14 kDa, DNA from Vaccinia virus)
- Dna-dependent rna polymerase subunit (Complex from Vaccinia virus)
- S-adenosylmethionine (398 Da, Ligand)