Resolution: 3.26 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sxz
Q-score: 0.402
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Resolution: 2.86 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz4
Q-score: 0.344
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Resolution: 2.84 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz7
Q-score: 0.308
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Resolution: 3.55 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz8
Q-score: 0.358
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Cryo-em of the gdp-bound human dynamin polymer assembled on the membrane in the super constricted state (full helix) (85 MDa, Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Resolution: 3.58 Å
EM Method: Helical reconstruction
Fitted PDBs: 8t0k
Q-score: 0.368
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin (full-length) helical polymer assembled on the membrane (98 MDa, Complex from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dynamin-1 (98 kDa, Protein from Homo sapiens)
Resolution: 3.97 Å
EM Method: Helical reconstruction
Fitted PDBs: 8t0r
Q-score: 0.336
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin (full-length) helical polymer assembled on the membrane (full helix) (98 MDa, Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dynamin-1 (98 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
BamABCDE bound to substrate EspP class 1
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7tsz
Q-score: 0.274
Doyle MT, Jimah JR, Dowdy T, Ohlemacher SI, Larion M, Hinshaw JE, Bernstein HD
Cell (2022) 185 pp. 1143- [ DOI: doi:10.1016/j.cell.2022.02.016 Pubmed: 35294859 ]
- Bamabcde bound to substrate espp class 1 (Complex from Escherichia coli)
- Maltose/maltodextrin-binding periplasmic protein,serine protease espp chimera (83 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (89 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (10 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
BamABCDE bound to substrate EspP class 2
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7tt0
Q-score: 0.331
Doyle MT, Jimah JR, Dowdy T, Ohlemacher SI, Larion M, Hinshaw JE, Bernstein HD
Cell (2022) 185 pp. 1143- [ DOI: doi:10.1016/j.cell.2022.02.016 Pubmed: 35294859 ]
- Maltose/maltodextrin-binding periplasmic protein,serine protease espp chimera (83 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (89 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (10 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Bamabcde bound to substrate espp class 2 (Complex from Escherichia coli)
BamABCDE bound to substrate EspP class 4
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7tt1
Q-score: 0.307
Doyle MT, Jimah JR, Dowdy T, Ohlemacher SI, Larion M, Hinshaw JE, Bernstein HD
Cell (2022) 185 pp. 1143- [ DOI: doi:10.1016/j.cell.2022.02.016 Pubmed: 35294859 ]
- Maltose/maltodextrin-binding periplasmic protein,serine protease espp chimera (83 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (89 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (10 kDa, Protein from Escherichia coli)
- Bamabcde bound to substrate espp class 4 (Complex from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
BamABCDE bound to substrate EspP class 3
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7tt2
Q-score: 0.349
Doyle MT, Jimah JR, Dowdy T, Ohlemacher SI, Larion M, Hinshaw JE, Bernstein HD
Cell (2022) 185 pp. 1143- [ DOI: doi:10.1016/j.cell.2022.02.016 Pubmed: 35294859 ]
- Bamabcde bound to substrate espp class 3 (Complex from Escherichia coli)
- Maltose/maltodextrin-binding periplasmic protein,serine protease espp chimera (83 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (89 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (10 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)