Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 8j7t
Q-score: 0.564
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Human znt7-fab complex (Complex from Homo sapiens)
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8j7u
Q-score: 0.412
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Human znt7-fab complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 8j7v
Q-score: 0.49
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Human znt7-fab complex (Complex from Homo sapiens)
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 8j7w
Q-score: 0.496
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Human znt7-fab complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8j7x
Q-score: 0.427
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Human znt7delta-his-loop-fab complex (Complex from Homo sapiens)
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8j7y
Q-score: 0.419
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Human znt7delta-his-loop-fab complex (Complex from Homo sapiens)
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 8j80
Q-score: 0.504
Bui HB, Watanabe S, Nomura N, Liu K, Uemura T, Inoue M, Tsutsumi A, Fujita H, Kinoshita K, Kato Y, Iwata S, Kikkawa M, Inaba K
Nat Commun (2023) 14 pp. 4770-4770 [ DOI: doi:10.1038/s41467-023-40521-5 Pubmed: 37553324 ]
- Light chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Zinc transporter 7 (43 kDa, Protein from Homo sapiens)
- Heavy chain of yn7114-08 fab (24 kDa, Protein from Mus musculus)
- Human znt7-fab complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 1
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7yag
Q-score: 0.473
Chen Z, Watanabe S, Hashida H, Inoue M, Daigaku Y, Kikkawa M, Inaba K
Sci Adv (2023) 9 pp. eadd9742-eadd9742 [ DOI: doi:10.1126/sciadv.add9742 Pubmed: 36867705 ]
- Calcium-transporting atpase type 2c member 1 (103 kDa, Protein from Homo sapiens)
- Megabody (Complex from Vicugna pacos)
- A complex of spca1a and megabody in e1-ca-amppcp state, subclass1 (Complex)
- Calcium ion (40 Da, Ligand)
- Spca1a (Complex from Homo sapiens)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Nanobody head piece of megabody (13 kDa, Protein from Vicugna pacos)
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 2
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 7yah
Q-score: 0.464
Chen Z, Watanabe S, Hashida H, Inoue M, Daigaku Y, Kikkawa M, Inaba K
Sci Adv (2023) 9 pp. eadd9742-eadd9742 [ Pubmed: 36867705 DOI: doi:10.1126/sciadv.add9742 ]
- The nanobody head piece of megabody. (13 kDa, Protein from Vicugna pacos)
- A complex of spca1a and megabody in e1-ca-amppcp state, subclass2 (Complex)
- Calcium ion (40 Da, Ligand)
- Calcium-transporting atpase type 2c member 1 (103 kDa, Protein from Homo sapiens)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Megabody (Complex from Vicugna pacos)
- Spca1a (Complex from Homo sapiens)
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 3
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 7yai
Q-score: 0.456
Chen Z, Watanabe S, Hashida H, Inoue M, Daigaku Y, Kikkawa M, Inaba K
Sci Adv (2023) 9 pp. eadd9742-eadd9742 [ DOI: doi:10.1126/sciadv.add9742 Pubmed: 36867705 ]
- Nanobody head piece of megabody (13 kDa, Protein from Vicugna pacos)
- Calcium-transporting atpase type 2c member 1 (103 kDa, Protein from Homo sapiens)
- Megabody (Complex from Vicugna pacos)
- Calcium ion (40 Da, Ligand)
- Spca1a (Complex from Homo sapiens)
- A complex of spca1a and megabody in e1-ca-amppcp state, subclass3 (Complex)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)