Structure of photosynthetic LH1-RC complex from the purple bacterium Blastochloris tepida
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 9j2f
Q-score: 0.725
Kimura Y, Kanno R, Mori K, Matsuda Y, Seto R, Takenaka S, Mino H, Ohkubo T, Honda M, Sasaki YC, Kishikawa J, Mitsuoka K, Mio K, Hall M, Purba ER, Mochizuki T, Mizoguchi A, Humbel BM, Madigan MT, Wang-Otomo Z-Y, Tani K
To Be Published
- Light-harvesting protein gamma1 (5 kDa, Protein from Blastochloris tepida)
- Heme c (618 Da, Ligand)
- Bacteriochlorophyll b (909 Da, Ligand)
- All-trans-1,2-dihydroneurosporene (540 Da, Ligand)
- Photosynthetic lh1-rc complex of blastochloris tepida (Complex from Blastochloris tepida)
- Photosynthetic reaction center subunit h (28 kDa, Protein from Blastochloris tepida)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Menaquinone-7 (648 Da, Ligand)
- Photosynthetic reaction center cytochrome c subunit (39 kDa, Protein from Blastochloris tepida)
- Water (18 Da, Ligand)
- Bacteriopheophytin b (887 Da, Ligand)
- Light-harvesting protein b-1015 gamma chain (5 kDa, Protein from Blastochloris tepida)
- Antenna complex alpha/beta subunit domain-containing protein (7 kDa, Protein from Blastochloris tepida)
- Reaction center protein l chain (30 kDa, Protein from Blastochloris tepida)
- Reaction center protein m chain (37 kDa, Protein from Blastochloris tepida)
- Magnesium ion (24 Da, Ligand)
- Ubiquinone-8 (727 Da, Ligand)
- 15-cis-1,2-dihydroneurosporene (540 Da, Ligand)
- Antenna complex alpha/beta subunit domain-containing protein (7 kDa, Protein from Blastochloris tepida)
- Diacyl glycerol (625 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kinoshita M, Kojima S, Minamino T, Uchihashi T, Kato T, Imada K, Homma M
To Be Published
Resolution: 3.23 Å
EM Method: Single-particle
Fitted PDBs: 8z4g
Q-score: 0.518
Takekawa N, Nishikino T, Kishikawa J, Hirose M, Kinoshita M, Kojima S, Minamino T, Uchihashi T, Kato T, Imada K, Homma M
To Be Published
Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T
Sci Rep (2023) 13 [ DOI: 10.1038/s41598-023-29396-0 Pubmed: 36755111 ]
Image sets:
GroEL on hydrophilized graphene grid (low particle density)
Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T
Sci Rep (2023) 13 [ DOI: 10.1038/s41598-023-29396-0 Pubmed: 36755111 ]
Image sets:
Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T
Sci Rep (2023) 13 [ DOI: 10.1038/s41598-023-29396-0 Pubmed: 36755111 ]
Image sets:
SARS-CoV-2 spike protein (1-up RBD) on EG-grid
Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T
Sci Rep (2023) 13 [ DOI: 10.1038/s41598-023-29396-0 Pubmed: 36755111 ]
Image sets:
SARS-CoV-2 spike protein (1-up RBD) on Quantifoil grid
Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T
Sci Rep (2023) 13 [ DOI: 10.1038/s41598-023-29396-0 Pubmed: 36755111 ]
Image sets: