Structure of OC43 spike in complex with polyclonal Fab1 (Donor 269)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7sb3
Q-score: 0.496
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ DOI: doi:10.1126/sciadv.abn2911 Pubmed: 35507649 ]
- Structure of oc43 spike in complex with polyclonal fab1 (donor 269) (Complex from Human coronavirus OC43)
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
Structure of OC43 spike in complex with polyclonal Fab2 (Donor 1412)
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7sb4
Q-score: 0.302
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ DOI: doi:10.1126/sciadv.abn2911 Pubmed: 35507649 ]
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Structure of oc43 spike in complex with polyclonal fab2 (donor 1412) (Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
Structure of OC43 spike in complex with polyclonal Fab3 (Donor 1412)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7sb5
Q-score: 0.379
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ DOI: doi:10.1126/sciadv.abn2911 Pubmed: 35507649 ]
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
- Palmitic acid (256 Da, Ligand)
- Structure of oc43 spike in complex with polyclonal fab3 (donor 1412) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab4 (Donor 269)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7sbv
Q-score: 0.544
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Structure of oc43 spike in complex with polyclonal fab4 (donor 269) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7sbw
Q-score: 0.533
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ DOI: doi:10.1126/sciadv.abn2911 Pubmed: 35507649 ]
- Structure of oc43 spike in complex with polyclonal fab5 (donor 1051) (Complex from Human coronavirus OC43)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
Structure of OC43 spike in complex with polyclonal Fab6 (Donor 1051)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sbx
Q-score: 0.571
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Structure of oc43 spike in complex with polyclonal fab6 (donor 1051) (Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of OC43 spike in complex with polyclonal Fab7 (Donor 269)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sby
Q-score: 0.586
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ DOI: doi:10.1126/sciadv.abn2911 Pubmed: 35507649 ]
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Structure of oc43 spike in complex with polyclonal fab7 (donor 269) (Complex from Human coronavirus OC43)
CryoEM structure of Venezuelan Equine Encephalitis virus (VEEV) TC-83 strain VLP
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7sfu
Q-score: 0.332
Kafai NM, Williamson LE, Binshtein E, Sukupolvi-Petty S, Gardner CL, Liu J, Mackin S, Kim AS, Kose N, Carnahan RH, Jung A, Droit L, Reed DS, Handley SA, Klimstra WB, Crowe JE, Diamond MS
J Exp Med (2022) 219 [ DOI: doi:10.1084/jem.20212532 Pubmed: 35297953 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (18 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7sfv
Q-score: 0.324
Kafai NM, Williamson LE, Binshtein E, Sukupolvi-Petty S, Gardner CL, Liu J, Mackin S, Kim AS, Kose N, Carnahan RH, Jung A, Droit L, Reed DS, Handley SA, Klimstra WB, Crowe JE, Diamond MS
J Exp Med (2022) 219 [ DOI: doi:10.1084/jem.20212532 Pubmed: 35297953 ]
- Hveev-63 fab light chain (22 kDa, Protein from Homo sapiens)
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (46 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hveev-63 fab heavy chain (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (17 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7sfw
Q-score: 0.508
Kafai NM, Williamson LE, Binshtein E, Sukupolvi-Petty S, Gardner CL, Liu J, Mackin S, Kim AS, Kose N, Carnahan RH, Jung A, Droit L, Reed DS, Handley SA, Klimstra WB, Crowe JE, Diamond MS
J Exp Med (2022) 219 [ DOI: doi:10.1084/jem.20212532 Pubmed: 35297953 ]
- Hveev-63 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Hveev-63 fab light chain (11 kDa, Protein from Homo sapiens)