Cryo-EM structure of Prefusion RSV F (RSV220975)
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9b2x
Q-score: 0.525
Bakkers MJG, Cox F, Koornneef A, Yu X, van Overveld D, Le L, van den Hoogen W, Vaneman J, Thoma A, Voorzaat R, Tettero L, Juraszek J, van der Fits L, Zahn R, Langedijk JPM
Nat Microbiol (2024) 9 pp. 3254-3267 [ DOI: doi:10.1038/s41564-024-01860-1 Pubmed: 39567664 ]
- Prefusion rsv f (rsv220975) (Complex from Human metapneumovirus)
- Fusion glycoprotein f0 (58 kDa, Protein from Human orthopneumovirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of HMPV (MPV-2cREKR)
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8vt2
Q-score: 0.569
Bakkers MJG, Ritschel T, Tiemessen M, Dijkman J, Zuffiano AA, Yu X, van Overveld D, Le L, Voorzaat R, van Haaren MM, de Man M, Tamara S, van der Fits L, Zahn R, Juraszek J, Langedijk JPM
Nat Commun (2024) 15 pp. 6270-6270 [ Pubmed: 39054318 DOI: doi:10.1038/s41467-024-50659-5 ]
Cryo-EM structure of HMPV (MPV-2cREKR)
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 8vt3
Q-score: 0.567
Bakkers MJG, Ritschel T, Tiemessen M, Dijkman J, Zuffiano AA, Yu X, van Overveld D, Le L, Voorzaat R, van Haaren MM, de Man M, Tamara S, van der Fits L, Zahn R, Juraszek J, Langedijk JPM
Nat Commun (2024) 15 pp. 6270-6270 [ Pubmed: 39054318 DOI: doi:10.1038/s41467-024-50659-5 ]
- Prefusion of hmpv (mpv-2crekr) trimer complex (Complex from Human metapneumovirus)
- Prefusion of hmpv (mpv-2crekr), c-fragment (41 kDa, Protein from Human metapneumovirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Prefusion of hmpv (mpv-2crekr), n-fragment (8 kDa, Protein from Human metapneumovirus)
Prefusion-stabilized Respirovirus type 3 Fusion protein
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8v5a
Q-score: 0.469
Langedijk JPM, Cox F, Johnson NV, van Overveld D, Le L, van den Hoogen W, Voorzaat R, Zahn R, van der Fits L, Juraszek J, McLellan JS, Bakkers MJG
Nat Commun (2024) 15 pp. 4629-4629 [ Pubmed: 38821950 DOI: doi:10.1038/s41467-024-48059-w ]
- Camelid nanobody 4c06 (12 kDa, Protein from Lama glama)
- Trimeric human respirovirus 3 fusion protein bound to 3 copies of nanobody 4c06 (232 kDa, Complex from Human respirovirus 3)
- Fusion glycoprotein f0 (54 kDa, Protein from Human respirovirus 3)
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 7a4n
Q-score: 0.521
Juraszek J, Rutten L, Blokland S, Bouchier P, Voorzaat R, Ritschel T, Bakkers MJG, Renault LLR, Langedijk JPM
Nat Commun (2021) 12 pp. 244-244 [ Pubmed: 33431842 DOI: doi:10.1038/s41467-020-20321-x ]
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 7ad1
Q-score: 0.532
Juraszek J, Rutten L, Blokland S, Bouchier P, Voorzaat R, Ritschel T, Bakkers MJG, Renault LLR, Langedijk JPM
Nat Commun (2021) 12 pp. 244-244 [ Pubmed: 33431842 DOI: doi:10.1038/s41467-020-20321-x ]
- S closed protein trimer (Cellular component from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein,envelope glycoprotein,spike glycoprotein,envelope glycoprotein,sars-cov-2 s protein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)