Sub-tomogram averaged structure of HIV-1 Envelope protein in native membrane
Resolution: 9.1 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7ska
Q-score: 0.067
Mangala Prasad V, Leaman DP, Lovendahl KN, Croft JT, Benhaim MA, Hodge EA, Zwick MB, Lee KK
Cell (2022) 185 pp. 641-653.e17 [ DOI: doi:10.1016/j.cell.2022.01.013 Pubmed: 35123651 ]
- Human immunodeficiency virus 1 (430 kDa, Virus from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Envelope glycoprotein gp41 (16 kDa, Protein from Human immunodeficiency virus 1)
- Alpha-l-fucopyranose (164 Da, Ligand)
- Envelope glycoprotein gp120 (52 kDa, Protein from Human immunodeficiency virus 1)
HIV Env BG505 NFL TD+ in complex with antibody E70 fragment antigen binding
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 6p62
Q-score: 0.453
Dubrovskaya V, Tran K, Ozorowski G, Guenaga J, Wilson R, Bale S, Cottrell CA, Turner HL, Seabright G, O'Dell S, Torres JL, Yang L, Feng Y, Leaman DP, Vazquez Bernat N, Liban T, Louder M, McKee K, Bailer RT, Movsesyan A, Doria-Rose NA, Pancera M, Karlsson Hedestam GB, Zwick MB, Crispin M, Mascola JR, Ward AB, Wyatt RT
Immunity (2019) 51 pp. 915-929.e7 [ DOI: doi:10.1016/j.immuni.2019.10.008 Pubmed: 31732167 ]
- Rabbit monoclonal antibody e70 kappa chain (22 kDa, Protein from Oryctolagus cuniculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 env bg505 nfl td+ (74 kDa, Protein from Human immunodeficiency virus 1)
- Rabbit monoclonal antibody e70 heavy chain fragment antigen binding (23 kDa, Protein from Oryctolagus cuniculus)
- Hiv-1 env bg505 nfl td+ in complex with rabbit monoclonal antibody e70 fragment antigen binding (570 kDa, Complex from Human immunodeficiency virus 1)
HIV Env 16055 NFL TD 2CC+ in complex with antibody 1C2 fragment antigen binding
Resolution: 3.94 Å
EM Method: Single-particle
Fitted PDBs: 6p65
Q-score: 0.388
Dubrovskaya V, Tran K, Ozorowski G, Guenaga J, Wilson R, Bale S, Cottrell CA, Turner HL, Seabright G, O'Dell S, Torres JL, Yang L, Feng Y, Leaman DP, Vazquez Bernat N, Liban T, Louder M, McKee K, Bailer RT, Movsesyan A, Doria-Rose NA, Pancera M, Karlsson Hedestam GB, Zwick MB, Crispin M, Mascola JR, Ward AB, Wyatt RT
Immunity (2019) 51 pp. 915-929.e7 [ DOI: doi:10.1016/j.immuni.2019.10.008 Pubmed: 31732167 ]
- Rabbit antibody 1c2 heavy chain fragment antigen binding (27 kDa, Protein from Oryctolagus cuniculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Rabbit antibody 1c2 kappa chain (25 kDa, Protein from Oryctolagus cuniculus)
- Hiv env 16055 nfl td 2cc+ in complex with antibody 1c2 fragment antigen binding (570 kDa, Complex from Human immunodeficiency virus 1)
- Hiv env 16055 nfl td 2cc+ (75 kDa, Protein from Human immunodeficiency virus 1)