Structure of the SbCas7-11-crRNA-NTR complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8gna
Q-score: 0.544
Wang X, Yu G, Wen Y, An Q, Li X, Liao F, Lian C, Zhang K, Yin H, Wei Y, Deng Z, Zhang H
Nucleic Acids Res (2022) 50 pp. 12913-12923 [ DOI: doi:10.1093/nar/gkac1151 Pubmed: 36484100 ]
- Rna (5'-r(p*gp*gp*gp*gp*cp*ap*gp*ap*ap*ap*ap*up*up*gp*gp*gp*u)-3') (14 kDa, RNA from Candidatus Scalindua brodae)
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Rna (32-mer) (10 kDa, RNA from Candidatus Scalindua brodae)
- Ternary complex (Complex from Candidatus Scalindua brodae)
Structure of the SbCas7-11-crRNA-NTR-Csx29 complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8gu6
Q-score: 0.496
Wang X, Yu G, Wen Y, An Q, Li X, Liao F, Lian C, Zhang K, Yin H, Wei Y, Deng Z, Zhang H
Nucleic Acids Res (2022) 50 pp. 12913-12923 [ DOI: doi:10.1093/nar/gkac1151 Pubmed: 36484100 ]
- Zinc ion (65 Da, Ligand)
- Ternary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Rna (5'-r(p*gp*gp*gp*gp*cp*ap*gp*ap*ap*ap*ap*up*up*gp*gp*gp*u)-3') (5 kDa, RNA from Candidatus Scalindua brodae)
- Rna (33-mer) (10 kDa, RNA from Candidatus Scalindua brodae)
- Chat domain protein (82 kDa, Protein from Candidatus Scalindua brodae)
Cryo-EM structure of SbCas7-11 in complex with crRNA and target RNA
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7x7a
Q-score: 0.523
Yu G, Wang X, Zhang Y, An Q, Wen Y, Li X, Yin H, Deng Z, Zhang H
Nat Microbiol (2022) 7 pp. 2078-2088 [ Pubmed: 36302881 DOI: doi:10.1038/s41564-022-01256-z ]
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Rna (33-mer) (10 kDa, RNA from Candidatus Scalindua brodae)
- Binary complex (Complex from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a bacterial protein
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7x7r
Q-score: 0.384
Yu G, Wang X, Zhang Y, An Q, Wen Y, Li X, Yin H, Deng Z, Zhang H
Nat Microbiol (2022) 7 pp. 2078-2088 [ Pubmed: 36302881 DOI: doi:10.1038/s41564-022-01256-z ]
- Rna (5'-r(p*ap*gp*up*cp*cp*gp*gp*gp*gp*cp*ap*gp*ap*ap*ap*ap*up*up*gp*g)-3') (14 kDa, RNA from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Binary complex (Complex from Candidatus Scalindua brodae)
- Rna (36-mer) (11 kDa, RNA from Candidatus Scalindua brodae)
Cryo-EM structure of a bacterial protein complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7x8a
Q-score: 0.545
Yu G, Wang X, Zhang Y, An Q, Wen Y, Li X, Yin H, Deng Z, Zhang H
Nat Microbiol (2022) 7 pp. 2078-2088 [ Pubmed: 36302881 DOI: doi:10.1038/s41564-022-01256-z ]
- Zinc ion (65 Da, Ligand)
- Complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Rna (33-mer) (10 kDa, RNA from Candidatus Scalindua brodae)
- Chat domain protein (82 kDa, Protein from Candidatus Scalindua brodae)
Cryo-EM structure of a bacterial protein complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7xc7
Q-score: 0.423
Yu G, Wang X, Zhang Y, An Q, Wen Y, Li X, Yin H, Deng Z, Zhang H
Nat Microbiol (2022) 7 pp. 2078-2088 [ Pubmed: 36302881 DOI: doi:10.1038/s41564-022-01256-z ]
- Zinc ion (65 Da, Ligand)
- Ramp superfamily protein (197 kDa, Protein from Candidatus Scalindua brodae)
- Chat domain protein (82 kDa, Protein from Candidatus Scalindua brodae)
- Quaternary complex (Complex from Candidatus Scalindua brodae)
- Rna (33-mer) (10 kDa, RNA from Candidatus Scalindua brodae)
- Rna (46-mer) (14 kDa, RNA from Candidatus Scalindua brodae)