the cryo-EM structure of human mini-SNAPc in complex with hU6-1 PSE
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 7xur
Q-score: 0.474
Sun J, Li X, Hou X, Cao S, Cao W, Zhang Y, Song J, Wang M, Wang H, Yan X, Li Z, Roeder RG, Wang W
Nat Commun (2022) 13 pp. 6871-6871 [ DOI: doi:10.1038/s41467-022-34639-1 Pubmed: 36369505 ]
- Dna (35-mer) (10 kDa, DNA from synthetic construct)
- Human mini-snapc (Complex from Homo sapiens)
- Snrna-activating protein complex subunit 3 (46 kDa, Protein from Homo sapiens)
- Snrna-activating protein complex subunit 4 (60 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Snrna-activating protein complex subunit 1 (33 kDa, Protein from Homo sapiens)
- Dna (Complex)
- The complex of human mini-snapc with hu6-1 pse (Complex)
- Dna (35-mer) (10 kDa, DNA from synthetic construct)
Cryo-EM structure of Chlamydomonas TOC-TIC supercomplex
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7vcf
Q-score: 0.589
Jin Z, Wan L, Zhang Y, Li X, Cao Y, Liu H, Fan S, Cao D, Wang Z, Li X, Pan J, Dong MQ, Wu J, Yan Z
Cell (2022) 185 pp. 4788-4800.e13 [ DOI: doi:10.1016/j.cell.2022.10.030 Pubmed: 36413996 ]
- Tic56 (28 kDa, Protein from Chlamydomonas reinhardtii)
- Tic35 (35 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Ylmg (21 kDa, Protein from Chlamydomonas reinhardtii)
- Tic20-venus-flag (60 kDa, Protein from Chlamydomonas reinhardtii)
- Unknown fragment (2 kDa, Protein from Chlamydomonas reinhardtii)
- Toc10 (10 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Tic12 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Toc75 (87 kDa, Protein from Chlamydomonas reinhardtii)
- Tic214 (232 kDa, Protein from Chlamydomonas reinhardtii)
- Toc34 (44 kDa, Protein from Chlamydomonas reinhardtii)
- Toc-tic supercomplex (Complex from Chlamydomonas reinhardtii)
- Toc52 (52 kDa, Protein from Chlamydomonas reinhardtii)
- Toc39 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Toc120 (102 kDa, Protein from Chlamydomonas reinhardtii)
- Water (18 Da, Ligand)
- Inositol hexakisphosphate (660 Da, Ligand)
- Tic13 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Tic100 (107 kDa, Protein from Chlamydomonas reinhardtii)
SARS-CoV-2 S-6P in complex with 9 Fabs
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 7e8c
Q-score: 0.39
Cao Y, Yisimayi A, Bai Y, Huang W, Li X, Zhang Z, Yuan T, An R, Wang J, Xiao T, Du S, Ma W, Song L, Li Y, Li X, Song W, Wu J, Liu S, Li X, Zhang Y, Su B, Guo X, Wei Y, Gao C, Zhang N, Zhang Y, Dou Y, Xu X, Shi R, Lu B, Jin R, Ma Y, Qin C, Wang Y, Feng Y, Xiao J, Xie XS
Cell Res (2021) 31 pp. 732-741 [ Pubmed: 34021265 DOI: doi:10.1038/s41422-021-00514-9 ]
- 604 h, 604 l, n9 h, 368-2 l, 368-2 h, n9 l (Complex)
- Sars-cov-2 s-6p in complex with 9 fabs (Complex from Severe acute respiratory syndrome coronavirus 2)
- 604 h (23 kDa, Protein from Homo sapiens)
- N9 h (24 kDa, Protein from Homo sapiens)
- 604 l (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 s (Complex from Homo sapiens)
- 368-2 h (24 kDa, Protein from Homo sapiens)
- N9 l (22 kDa, Protein from Homo sapiens)
- 368-2 l (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 NTD in complex with N9 Fab
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7e8f
Q-score: 0.592
Cao Y, Yisimayi A, Bai Y, Huang W, Li X, Zhang Z, Yuan T, An R, Wang J, Xiao T, Du S, Ma W, Song L, Li Y, Li X, Song W, Wu J, Liu S, Li X, Zhang Y, Su B, Guo X, Wei Y, Gao C, Zhang N, Zhang Y, Dou Y, Xu X, Shi R, Lu B, Jin R, Ma Y, Qin C, Wang Y, Feng Y, Xiao J, Xie XS
Cell Res (2021) 31 pp. 732-741 [ Pubmed: 34021265 DOI: doi:10.1038/s41422-021-00514-9 ]
- 368-2 l (23 kDa, Protein from Homo sapiens)
- 604 h (23 kDa, Protein from Homo sapiens)
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N9 h (24 kDa, Protein from Homo sapiens)
- Spike protein s1 (33 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 ntd and rbd (Complex from Homo sapiens)
- 368-2 h (24 kDa, Protein from Homo sapiens)
- 604 l (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 ntd in complex with n9 fab (Complex from SARS coronavirus Tor2)
- N9 l (22 kDa, Protein from Homo sapiens)
- N9, 368-2 and 604h fab (Complex)
Cryo-EM structures of the 50S ribosome subunit bound with HflX
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 5ady
Q-score: 0.289
Zhang Y, Mandava CS, Cao W, Li X, Zhang D, Li N, Zhang Y, Zhang X, Qin Y, Mi K, Lei J, Sanyal S, Gao N
Nat Struct Mol Biol (2015) 22 pp. 906-913 [ DOI: doi:10.1038/nsmb.3103 Pubmed: 26458047 ]
- Hflx (50 kDa, Protein from Escherichia coli)
- 50s-hflx complex (1 MDa, Sample)
- Prokaryotic 50s ribosome subunit (1 MDa, Complex from Escherichia coli K-12)