EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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author:"Li X" AND author_name:"Zhang Y" AND author_orcid:"0000-0003-3067-9993"

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EMD-9918

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Cryo-EM structure of the tetrameric photosystem I from a heterocyst-forming cyanobacterium Anabaena sp. PCC7120

Release date: Oct. 9, 2019
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 6k61
Q-score: 0.65

Zheng L, Li Y, Li X, Zhong Q, Li N, Zhang K, Zhang Y, Chu H, Ma C, Li G, Zhao J, Gao N

Nat Plants (2019) 5 pp. 1087-1097 [ Pubmed: 31595062 DOI: doi:10.1038/s41477-019-0525-6 ]

Sample:

Photosystem i reaction center subunit ix (5 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Nostoc sp. PCC 7120)
Phylloquinone (450 Da, Ligand)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Photosystem i reaction center subunit psak 1 (8 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i iron-sulfur center (8 kDa, Protein from Nostoc sp. PCC 7120)
Beta-carotene (536 Da, Ligand)
Photosystem i p700 chlorophyll a apoprotein a2 1 (83 kDa, Protein from Nostoc sp. PCC 7120)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Photosystem i reaction center subunit iv (7 kDa, Protein from Nostoc sp. PCC 7120)
Chlorophyll a isomer (893 Da, Ligand)
1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
Photosystem i 4.8 kda protein (4 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i reaction center subunit xii (3 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i complex of cyanobacterium anabaena sp. pcc 7120 (1 MDa, Cellular component from Nostoc sp. PCC 7120)
Photosystem i reaction center subunit iii (17 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i reaction center subunit viii (5 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i reaction center subunit xi (18 kDa, Protein from Nostoc sp. PCC 7120)
Photosystem i reaction center subunit ii (15 kDa, Protein from Nostoc sp. PCC 7120)
Iron/sulfur cluster (351 Da, Ligand)
Chlorophyll a (893 Da, Ligand)

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EMD-3133

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Cryo-EM structures of the 50S ribosome subunit bound with HflX

Release date: Oct. 14, 2015
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 5ady
Q-score: 0.289

Zhang Y, Mandava CS, Cao W, Li X, Zhang D, Li N, Zhang Y, Zhang X, Qin Y, Mi K, Lei J, Sanyal S, Gao N

Nat Struct Mol Biol (2015) 22 pp. 906-913 [ Pubmed: 26458047 DOI: doi:10.1038/nsmb.3103 ]

Sample:

Prokaryotic 50s ribosome subunit (1 MDa, Complex from Escherichia coli K-12)
50s-hflx complex (1 MDa, Sample)
Hflx (50 kDa, Protein from Escherichia coli)

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