Cryo-EM structure of the red-shifted Fittonia albivenis PSI-LHCI
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8wgh
Q-score: 0.665
Li X, Huang G, Zhu L, Hao C, Sui SF, Qin X
Nat Commun (2024) 15 pp. 6325-6325 [ DOI: doi:10.1038/s41467-024-50655-9 Pubmed: 39060282 ]
- Phylloquinone (450 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Fittonia albivenis)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Chlorophyll a-b binding protein 2 (28 kDa, Protein from Fittonia albivenis)
- Photosystem i iron-sulfur center (9 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit ii (21 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit xi (23 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit n (18 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit psak (13 kDa, Protein from Fittonia albivenis)
- Beta-carotene (536 Da, Ligand)
- Photosystem i reaction center subunit ix (5 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit vi (15 kDa, Protein from Fittonia albivenis)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Chlorophyll a-b binding protein 4 (27 kDa, Protein from Fittonia albivenis)
- Photosystem i complex (Complex from Fittonia albivenis)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Photosystem i reaction center subunit viii (15 kDa, Protein from Fittonia albivenis)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Fittonia albivenis)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Photosystem i reaction center subunit iv (16 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Fittonia albivenis)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Chlorophyll a-b binding protein 3 (29 kDa, Protein from Fittonia albivenis)
- Heptyl 1-thio-beta-d-glucopyranoside (294 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Chlorophyll a-b binding protein 1 (26 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit o (15 kDa, Protein from Fittonia albivenis)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Fittonia albivenis)
Cryo-EM Structure of the ATP-bound VPS4 mutant-E233Q hexamer (masked)
Cryo-EM structure of the ATP-bound Vps4 mutant-E233Q complex with Vta1 (masked)
Resolution: 4.18 Å
EM Method: Single-particle
Fitted PDBs: 5xmk
Q-score: 0.189
Sun S, Li L, Yang F, Wang X, Fan F, Yang M, Chen C, Li X, Wang HW, Sui SF
Nat Commun (2017) 8 pp. 16064-16064 [ DOI: doi:10.1038/ncomms16064 Pubmed: 28714467 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Vacuolar protein sorting-associated protein vta1 (37 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Vacuolar protein sorting-associated protein 4 (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Vps4-e233q hexamer complexed with vta1 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of ATP-bound Vps4 mutant-E233Q complex with Vta1 (unmasked)
Sun S, Li L, Yang F, Wang X, Fan F, Yang M, Chen C, Li X, Wang HW, Sui SF
Nat Commun (2017) 8 pp. 16064-16064 [ DOI: doi:10.1038/ncomms16064 Pubmed: 28714467 ]
- Vacuolar protein sorting-associated protein 4 (48 kDa, Protein from Saccharomyces cerevisiae S288c)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Vacuolar protein sorting-associated protein vta1 (37 kDa, Protein from Saccharomyces cerevisiae S288c)
- Vps4-e233q hexamer complexed with vta1 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))