MicroED structure of orthorhombic Vancomycin at 1.2 A resolution
Resolution: 1.2 Å
EM Method: Electron Crystallography
Fitted PDBs: 7c4u
Q-score: 0.803
Fan Q, Li L, Xue H, Zhou H, Zhao L, Liu J, Mao J, Wu S, Zhang S, Wu C, Li X, Zhou X, Wang J
Angew Chem Int Ed Engl (2020) 59 pp. 15141-15146 [ DOI: doi:10.1002/anie.202003922 Pubmed: 32432368 ]
- Vancomycin (1 kDa, Protein from Amycolatopsis orientalis)
- Chloride ion (35 Da, Ligand)
- Water (18 Da, Ligand)
- Vancomycin (Complex from Amycolatopsis orientalis)
MicroED structure of anorthic Vancomycin at 1.05 A resolution
Resolution: 1.05 Å
EM Method: Electron Crystallography
Fitted PDBs: 7c4v
Q-score: 0.676
Fan Q, Li L, Xue H, Zhou H, Zhao L, Liu J, Mao J, Wu S, Zhang S, Wu C, Li X, Zhou X, Wang J
Angew Chem Int Ed Engl (2020) 59 pp. 15141-15146 [ DOI: doi:10.1002/anie.202003922 Pubmed: 32432368 ]
- Vancomycin (1 kDa, Protein from Amycolatopsis orientalis)
- Chloride ion (35 Da, Ligand)
- Water (18 Da, Ligand)
- Vancomycin (Complex from Amycolatopsis orientalis)
Resolution: 1.5 Å
EM Method: Electron Crystallography
Fitted PDBs: 6law
Q-score: 0.894
J Struct Biol (2019) 205 pp. 59-64 [ Pubmed: 30794865 DOI: doi:10.1016/j.jsb.2019.02.004 ]
- Proteinase k (28 kDa, Protein from Parengyodontium album)
- Proteinase k (Complex from Parengyodontium album)
- Sulfate ion (96 Da, Ligand)
- Water (18 Da, Ligand)
Resolution: 1.73 Å
EM Method: Electron Crystallography
Fitted PDBs: 6lav
Q-score: 0.811
J Struct Biol (2019) 205 pp. 59-64 [ Pubmed: 30794865 DOI: doi:10.1016/j.jsb.2019.02.004 ]
- Lysozyme c (14 kDa, Protein from Gallus gallus)
- Water (18 Da, Ligand)
- Acetate ion (59 Da, Ligand)
- Lysozyme (Complex from Gallus gallu)
200kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.65 A
Resolution: 0.65 Å
EM Method: Electron Crystallography
Fitted PDBs: 6kj1
Q-score: 0.973
Zhou H, Luo F, Luo Z, Li D, Liu C, Li X
Anal Chem (2019) 91 pp. 10996-11003 [ DOI: doi:10.1021/acs.analchem.9b01162 Pubmed: 31334636 ]
- Water (18 Da, Ligand)
- Rna-binding protein fus (662 Da, Protein from Homo sapiens)
- Fus lc rac1 (Complex)
200kV MicroED structure of FUS (37-42) SYSGYS solved from single crystal at 0.67 A
Resolution: 0.67 Å
EM Method: Electron Crystallography
Fitted PDBs: 6kj2
Q-score: 0.972
Zhou H, Luo F, Luo Z, Li D, Liu C, Li X
Anal Chem (2019) 91 pp. 10996-11003 [ DOI: doi:10.1021/acs.analchem.9b01162 Pubmed: 31334636 ]
- Water (18 Da, Ligand)
- Rna-binding protein fus (662 Da, Protein from Homo sapiens)
- Fus lc rac1 (Complex)
Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 5v93
Q-score: 0.321
Yang K, Chang JY, Cui Z, Li X, Meng R, Duan L, Thongchol J, Jakana J, Huwe CM, Sacchettini JC, Zhang J
Nucleic Acids Res (2017) 45 pp. 10884-10894 [ DOI: doi:10.1093/nar/gkx785 Pubmed: 28977617 ]
- 50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis)
- Capreomycin (670 Da, Protein from Streptomyces puniceus)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis)
- Mitochondrial domain of uncharacterised function (duf1713) (4 kDa, Protein from Mycobacterium tuberculosis)
- 5s rrna (37 kDa, RNA from Mycobacterium tuberculosis)
- 50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l13 (16 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s18 (9 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis)
- Ribosome from human pathogen mycobacterium tuberculosis (Complex from Mycobacterium tuberculosis)
- 50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l33 (6 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis)
- 30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis)
- 16s rrna (498 kDa, RNA from Mycobacterium tuberculosis)
- 50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis)
- Lsu ribosomal protein l21p (11 kDa, Protein from Mycobacterium tuberculosis)
- 23s rrna (1 MDa, RNA from Mycobacterium tuberculosis)
Locally-refined cryo-EM structure of the small ribosomal subunit from Mycobacterium tuberculosis
Yang K, Chang JY, Cui Z, Li X, Meng R, Duan L, Thongchol J, Jakana J, Huwe CM, Sacchettini JC, Zhang J
Nucleic Acids Res (2017) 45 pp. 10884-10894 [ DOI: doi:10.1093/nar/gkx785 Pubmed: 28977617 ]
Cryo-EM structure of the 70S ribosome from Mycobacterium smegmatis
Yang K, Chang JY, Cui Z, Li X, Meng R, Duan L, Thongchol J, Jakana J, Huwe CM, Sacchettini JC, Zhang J
Nucleic Acids Res (2017) 45 pp. 10884-10894 [ DOI: doi:10.1093/nar/gkx785 Pubmed: 28977617 ]
Focused classification of the 70S ribosome from Mycobacterium tuberculosis
Yang K, Chang JY, Cui Z, Li X, Meng R, Duan L, Thongchol J, Jakana J, Huwe CM, Sacchettini JC, Zhang J
Nucleic Acids Res (2017) 45 pp. 10884-10894 [ DOI: doi:10.1093/nar/gkx785 Pubmed: 28977617 ]