Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 8yak
Q-score: 0.652
Hu Y, Dai L, Xu Y, Niu D, Yang X, Xie Z, Shen P, Li X, Li H, Zhang L, Min J, Guo RT, Chen CC
Int J Biol Macromol (2024) 278 pp. 134831-134831 [ Pubmed: 39163957 DOI: doi:10.1016/j.ijbiomac.2024.134831 ]
- (2~{s})-2-[[(3~{r})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid (403 Da, Ligand)
- Imidazolonepropionase (43 kDa, Protein from Pseudoxanthomonas wuyuanensis)
- Pwadh-g88d-d344n (Complex from Pseudoxanthomonas wuyuanensis)
- Zinc ion (65 Da, Ligand)
Cryo-electron microscopic structure of an amide hydrolase from Pseudoxanthomonas wuyuanensis
Resolution: 2.33 Å
EM Method: Single-particle
Fitted PDBs: 8yag
Q-score: 0.665
Hu Y, Dai L, Xu Y, Niu D, Yang X, Xie Z, Shen P, Li X, Li H, Zhang L, Min J, Guo RT, Chen CC
Int J Biol Macromol (2024) 278 pp. 134831-134831 [ Pubmed: 39163957 DOI: doi:10.1016/j.ijbiomac.2024.134831 ]
- Pwadh (Complex from Pseudoxanthomonas wuyuanensis)
- Imidazolonepropionase (43 kDa, Protein from Pseudoxanthomonas wuyuanensis)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of apo-GPR30-Gq complex structure
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8xog
Q-score: 0.462
Liu H, Guo S, Dai A, Xu P, Li X, Huang S, He X, Wu K, Zhang X, Yang D, Xie X, Xu HE
Cell Res (2024) 34 pp. 530-533 [ DOI: doi:10.1038/s41422-024-00963-y Pubmed: 38744981 ]
- Scfv16 (Complex from synthetic construct)
- Scfv16 (26 kDa, Protein from synthetic construct)
- Water (18 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Gpr30-gq complex (Complex)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(q) subunit alpha-q (41 kDa, Protein from Homo sapiens)
- Gpr30-gq (Complex from Homo sapiens)
- G-protein coupled estrogen receptor 1 (42 kDa, Protein from Homo sapiens)
Human VMAT2 in complex with tetrabenazine
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8t69
Q-score: 0.558
Pidathala S, Liao S, Dai Y, Li X, Long C, Chang CL, Zhang Z, Lee CH
Nature (2023) 623 pp. 1086-1092 [ DOI: doi:10.1038/s41586-023-06727-9 Pubmed: 37914936 ]
- Synaptic vesicular amine transporter (53 kDa, Protein from Homo sapiens)
- Human vmat2 in complex with tetrabenazine (Complex from Homo sapiens)
- Tetrabenazine (317 Da, Ligand)
Human VMAT2 in complex with reserpine
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 8t6a
Q-score: 0.504
Pidathala S, Liao S, Dai Y, Li X, Long C, Chang CL, Zhang Z, Lee CH
Nature (2023) 623 pp. 1086-1092 [ DOI: doi:10.1038/s41586-023-06727-9 Pubmed: 37914936 ]
- Synaptic vesicular amine transporter (53 kDa, Protein from Homo sapiens)
- Human vmat2 in complex with reserpine (Complex from Homo sapiens)
- Reserpine (608 Da, Ligand)
Human VMAT2 in complex with serotonin
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8t6b
Q-score: 0.39
Pidathala S, Liao S, Dai Y, Li X, Long C, Chang CL, Zhang Z, Lee CH
Nature (2023) 623 pp. 1086-1092 [ DOI: doi:10.1038/s41586-023-06727-9 Pubmed: 37914936 ]
- Human vmat2 in complex with serotonin (Complex from Homo sapiens)
- Serotonin (176 Da, Ligand)
- Synaptic vesicular amine transporter (53 kDa, Protein from Homo sapiens)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 8ihq
Q-score: 0.632
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ DOI: doi:10.1016/j.jhazmat.2023.131836 Pubmed: 37331057 ]
- Zinc ion (65 Da, Ligand)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with Phe
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ihr
Q-score: 0.666
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ DOI: doi:10.1016/j.jhazmat.2023.131836 Pubmed: 37331057 ]
- Zinc ion (65 Da, Ligand)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- Phenylalanine (165 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with ochratoxin A
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ihs
Q-score: 0.645
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ DOI: doi:10.1016/j.jhazmat.2023.131836 Pubmed: 37331057 ]
- Zinc ion (65 Da, Ligand)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- (2~{s})-2-[[(3~{r})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid (403 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8j85
Q-score: 0.568
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ DOI: doi:10.1016/j.jhazmat.2023.131836 Pubmed: 37331057 ]
- Zinc ion (65 Da, Ligand)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- (2~{s})-2-[[(3~{r})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid (403 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)