Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C2 state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7wvp
Q-score: 0.143
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 Pubmed: 35228716 ]
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Sars-cov-2 omicron spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 receptor (Complex)
- Cryo-em structure of sars-cov-2 omicron spike protein with human ace2 receptor, c2 state (Complex from Homo sapiens)
Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C3 state
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7wvq
Q-score: 0.057
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 Pubmed: 35228716 ]
- Cryo-em structure of sars-cov-2 omicron spike protein with human ace2 receptor, c3 state (Complex from Homo sapiens)
- Omicron spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Human ace2 receptor (Complex)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7wvn
Q-score: 0.247
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 Pubmed: 35228716 ]
- Omicron s-open (Complex)
- Omicron s-open (Complex from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-2 omicron varient (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (Complex from Homo sapiens)
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 7wvo
Q-score: 0.254
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 Pubmed: 35228716 ]
- Omicron s-open-2 (Complex from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Omicron s-open-2 (Complex)
- Sars-cov-2 omicron varient (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (Complex from Homo sapiens)
RBD-1 of SARS-CoV-2 Beta spike in complex with S5D2 Fab
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7wcr
Q-score: 0.354
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Light chain of s5d2 fab (Complex)
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Rbd-1 of sars-cov-2 beta spike in complex with s5d2 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Light chain of s5d2 fab (24 kDa, Protein from Mus musculus)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s5d2 fab (Complex from Mus musculus)
- Heavy chain of s5d2 fab (23 kDa, Protein from Mus musculus)
SARS-CoV-2 Beta spike in complex with one S5D2 Fab
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7wcz
Q-score: 0.256
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Light chain of s5d2 fab (Complex)
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Light chain of s5d2 fab (24 kDa, Protein from Mus musculus)
- Sars-cov-2 beta spike in complex with one s5d2 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s5d2 fab (Complex from Mus musculus)
- Heavy chain of s5d2 fab (23 kDa, Protein from Mus musculus)
SARS-CoV-2 Beta spike in complex with two S5D2 Fabs
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7wd0
Q-score: 0.291
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Light chain of s5d2 fab (Complex)
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Light chain of s5d2 fab (24 kDa, Protein from Mus musculus)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 beta spike in complex with two s5d2 fabs (Complex from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s5d2 fab (Complex from Mus musculus)
- Heavy chain of s5d2 fab (23 kDa, Protein from Mus musculus)
SARS-CoV-2 Beta spike in complex with three S5D2 Fabs
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7wd7
Q-score: 0.22
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Light chain of s5d2 fab (24 kDa, Protein from Mus musculus)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 beta spike in complex with two s5d2 fabs (Complex from Severe acute respiratory syndrome coronavirus 2)
- Light chain of s5d2 fab (Complex from Mus musculus)
- Heavy chain of s5d2 fab (Complex)
- Heavy chain of s5d2 fab (23 kDa, Protein from Mus musculus)
SARS-CoV-2 Beta spike SD1 in complex with S3H3 Fab
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7wd8
Q-score: 0.28
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Light chain of s3h3 fab (Complex from Mus musculus)
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Light chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Heavy chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s3h3 fab (Complex)
- Sars-cov-2 beta spike in complex with s3h3 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Partial spike of sars-cov-2 beta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Beta spike in complex with three S3H3 Fabs
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7wd9
Q-score: 0.204
Xu S, Wang Y, Wang Y, Zhang C, Hong Q, Gu C, Xu R, Wang T, Yang Y, Zang J, Zhou Y, Li Z, Liu Q, Zhou B, Bai L, Zhu Y, Deng Q, Wang H, Lavillette D, Wong G, Xie Y, Cong Y, Huang Z
Emerg Microbes Infect (2022) 11 pp. 351-367 [ Pubmed: 34964428 DOI: doi:10.1080/22221751.2021.2024455 ]
- Light chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Light chain of s3h3 fab (Complex)
- Heavy chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 beta spike in complex with s3h3 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s3h3 fab (Complex from Severe acute respiratory syndrome coronavirus 2)