Cryo-EM structure of CRISPR-Cas surveillance complex with AcrIF4
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7jzw
Q-score: 0.541
Gabel C, Li Z, Zhang H, Chang L
Nucleic Acids Res (2021) 49 pp. 584-594 [ Pubmed: 33332569 DOI: doi:10.1093/nar/gkaa1199 ]
- Crispr-associated endonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Crispr repeat sequence (19 kDa, RNA from Pseudomonas aeruginosa)
- Crispr-cas complex (Complex from Pseudomonas aeruginosa)
- Type i-f anti-crispr protein (11 kDa, Protein from Pseudomonas phage sp.)
- Crispr type i-f/ypest-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
Cryo-EM structure of CRISPR-Cas surveillance complex with AcrIF7
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7jzx
Q-score: 0.515
Gabel C, Li Z, Zhang H, Chang L
Nucleic Acids Res (2021) 49 pp. 584-594 [ Pubmed: 33332569 DOI: doi:10.1093/nar/gkaa1199 ]
- Crispr-associated endonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Crispr-cas complex (Complex from Pseudomonas aeruginosa)
- Acrf7 (9 kDa, Protein from Pseudomonas aeruginosa)
- Crispr-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Rna (61-mer) (19 kDa, RNA from Pseudomonas aeruginosa)
- Type i-f crispr-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
Cryo-EM structure of CRISPR-Cas surveillance complex with AcrIF14
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7jzz
Q-score: 0.513
Gabel C, Li Z, Zhang H, Chang L
Nucleic Acids Res (2021) 49 pp. 584-594 [ Pubmed: 33332569 DOI: doi:10.1093/nar/gkaa1199 ]
- Crispr-cas complex (Complex from Pseudomonas aeruginosa)
- Acrf14 (14 kDa, Protein from unidentified)
- Crispr-associated protein csy1 (49 kDa, Protein from Pseudomonas aeruginosa)
- Type i-f crispr-associated endoribonuclease cas6/csy4 (21 kDa, Protein from Pseudomonas aeruginosa)
- Rna (61-mer) (19 kDa, RNA from Pseudomonas aeruginosa)
- Type i-f crispr-associated protein csy2 (36 kDa, Protein from Pseudomonas aeruginosa)
- Crispr type i-f/ypest-associated protein csy3 (37 kDa, Protein from Pseudomonas aeruginosa)
CryoEM structure of the LbCas12a-crRNA-AcrVA4 complex
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 6nma
Q-score: 0.489
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Protein complex 4 (Complex from Lachnospiraceae bacterium ND2006)
- Acrva1 (27 kDa, Protein from Moraxella bovoculi)
- Magnesium ion (24 Da, Ligand)
- Rna (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
CryoEM structure of the LbCas12a-crRNA-2xAcrVA1 complex
Resolution: 4.24 Å
EM Method: Single-particle
Fitted PDBs: 6nmc
Q-score: 0.295
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Water (18 Da, Ligand)
- Protein complex 3 (Complex from Lachnospiraceae bacterium ND2006)
- Acrva1 (19 kDa, Protein from Moraxella bovoculi)
- Magnesium ion (24 Da, Ligand)
- Rna (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
cryo-EM Structure of the LbCas12a-crRNA-AcrVA1 complex
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6nmd
Q-score: 0.185
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Water (18 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Crrna (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Acrva1 (20 kDa, Protein from Moraxella bovoculi)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
- Protein complex 2 (Complex from Lachnospiraceae bacterium ND2006)
Resolution: 5.67 Å
EM Method: Single-particle
Fitted PDBs: 6nme
Q-score: 0.001
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Protein complex 1 (Complex from Lachnospiraceae bacterium ND2006)
- Magnesium ion (24 Da, Ligand)
- Crrna (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
- Water (18 Da, Ligand)
CryoEM structure of the LbCas12a-crRNA-AcrVA4 dimer
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 6nm9
Q-score: 0.411
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Rna (25-mer) (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Acrva4 (27 kDa, Protein from Moraxella bovoculi)
- Protein complex 5 (Complex from Lachnospiraceae bacterium ND2006)
- Magnesium ion (24 Da, Ligand)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
CryoEM structure of the LbCas12a-crRNA-AcrVA4-DNA complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6omv
Q-score: 0.348
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815- [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]
- Water (18 Da, Ligand)
- Dna (5'-d(*cp*gp*tp*cp*cp*tp*tp*tp*ap*gp*gp*a)-3') (3 kDa, DNA from Lachnospiraceae bacterium ND2006)
- Acrva4 (27 kDa, Protein from Moraxella bovoculi)
- Dna (5'-d(p*tp*ap*ap*tp*tp*tp*cp*cp*tp*ap*ap*ap*gp*gp*ap*cp*g)-3') (5 kDa, DNA from Lachnospiraceae bacterium ND2006)
- Magnesium ion (24 Da, Ligand)
- Rna (12 kDa, RNA from Lachnospiraceae bacterium ND2006)
- Dna complex (Complex from Lachnospiraceae bacterium ND2006)
- Cpf1 (143 kDa, Protein from Lachnospiraceae bacterium ND2006)
Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L
Cell Host Microbe (2019) 25 pp. 815-826.e4 [ DOI: doi:10.1016/j.chom.2019.05.004 Pubmed: 31155345 ]