CryoEM structure of type III-E CRISPR gRAMP-crRNA binary complex
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 7y80
Q-score: 0.562
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Type iii-e crispr gramp-crrna binary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Gramp (Complex from Candidatus Scalindua brodae)
- Crrna (Complex)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
CryoEM structure of type III-E CRISPR gRAMP-crRNA complex bound to non-self RNA target
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 7y81
Q-score: 0.607
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Non-self rna target (Complex)
- Type iii-e crispr gramp-crrna binary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Gramp (Complex from Candidatus Scalindua brodae)
- Crrna (Complex)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
- Non-self rna target (18 kDa, RNA from Candidatus Scalindua brodae)
CryoEM structure of type III-E CRISPR gRAMP-crRNA complex bound to self RNA target
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 7y82
Q-score: 0.551
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Self rna target (Complex)
- Type iii-e crispr gramp-crrna binary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Gramp (Complex from Candidatus Scalindua brodae)
- Crrna (Complex)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
- Self rna target (18 kDa, RNA from Candidatus Scalindua brodae)
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 7y83
Q-score: 0.53
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Type iii-e crispr gramp-crrna binary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Gramp (Complex from Candidatus Scalindua brodae)
- Crrna (Complex)
- Non-self rna (18 kDa, RNA from Candidatus Scalindua brodae)
- Tpr-chat (Complex)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Chat domain protein (85 kDa, Protein from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
- Non-self rna target (Complex from Candidatus Scalindua brodae)
CryoEM structure of type III-E CRISPR gRAMP-crRNA in complex with TPR-CHAT
Resolution: 2.61 Å
EM Method: Single-particle
Fitted PDBs: 7y84
Q-score: 0.614
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Crrna (Complex)
- Type iii-e crispr gramp-crrna in complex with tpr-chat (Complex from Candidatus Scalindua brodae)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Ramp superfamily protein/chat (Complex from Candidatus Scalindua brodae)
- Chat domain protein (85 kDa, Protein from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
CryoEM structure of type III-E CRISPR gRAMP-crRNA in complex with TPR-CHAT bound to self RNA target
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 7y85
Q-score: 0.57
Cui N, Zhang JT, Li Z, Liu XY, Wang C, Huang H, Jia N
Nat Commun (2022) 13 pp. 7549-7549 [ Pubmed: 36477448 DOI: doi:10.1038/s41467-022-35275-5 ]
- Type iii-e crispr gramp-crrna binary complex (Complex from Candidatus Scalindua brodae)
- Ramp superfamily protein (198 kDa, Protein from Candidatus Scalindua brodae)
- Zinc ion (65 Da, Ligand)
- Gramp (Complex from Candidatus Scalindua brodae)
- Crrna (Complex)
- Self rna target (Complex from Candidatus Scalindua brodae)
- Tpr-chat (Complex)
- Crrna (35 kDa, RNA from Candidatus Scalindua brodae)
- Chat domain protein (85 kDa, Protein from Candidatus Scalindua brodae)
- Magnesium ion (24 Da, Ligand)
- Self rna target (18 kDa, RNA from Candidatus Scalindua brodae)