SARS-CoV-2 Spike in complex with neutralizing Fab 2B04 (one up, two down conformation)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7k9h
Q-score: 0.455
Errico JM, Zhao H, Chen RE, Liu Z, Case JB, Ma M, Schmitz AJ, Rau MJ, Fitzpatrick JAJ, Shi PY, Diamond MS, Whelan SPJ, Ellebedy AH, Fremont DH
Cell Rep (2021) 37 pp. 109881-109881 [ DOI: doi:10.1016/j.celrep.2021.109881 Pubmed: 34655519 ]
- 2b04 heavy chain (13 kDa, Protein from Mus musculus)
- Sars-cov-2 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab fragment of neutralizing monoclonal antibody 2b04 (Complex from Homo sapiens)
- Complex of sars-cov-2 spike with fab fragments of neutralizing antibody 2b04 (Complex)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2b04 light chain (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2B04 (local refinement)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7k9i
Q-score: 0.476
Errico JM, Zhao H, Chen RE, Liu Z, Case JB, Ma M, Schmitz AJ, Rau MJ, Fitzpatrick JAJ, Shi PY, Diamond MS, Whelan SPJ, Ellebedy AH, Fremont DH
Cell Rep (2021) 37 pp. 109881-109881 [ DOI: doi:10.1016/j.celrep.2021.109881 Pubmed: 34655519 ]
- 2b04 heavy chain (13 kDa, Protein from Mus musculus)
- Complex of sars-cov-2 spike with fab fragment of monoclonal antibody 2b04 (Complex)
- Sars-cov-2 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2b04 light chain (11 kDa, Protein from Mus musculus)
- Fab fragment of monoclonal antibody 2b04 (Complex from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike in complex with neutralizing Fab 2H04 (three down conformation)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7k9j
Q-score: 0.457
Errico JM, Zhao H, Chen RE, Liu Z, Case JB, Ma M, Schmitz AJ, Rau MJ, Fitzpatrick JAJ, Shi PY, Diamond MS, Whelan SPJ, Ellebedy AH, Fremont DH
Cell Rep (2021) 37 pp. 109881-109881 [ DOI: doi:10.1016/j.celrep.2021.109881 Pubmed: 34655519 ]
- 2h04 light chain (11 kDa, Protein from Mus musculus)
- Fab fragments of neutralizing antibody 2h04 (Complex from Mus musculus)
- Sars-cov-2 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
- Complex of sars-cov-2 spike with fab fragments of neutralizing antibody 2h04 (Complex)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2h04 heavy chain (13 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2H04 (local refinement)
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 7k9k
Q-score: 0.475
Errico JM, Zhao H, Chen RE, Liu Z, Case JB, Ma M, Schmitz AJ, Rau MJ, Fitzpatrick JAJ, Shi PY, Diamond MS, Whelan SPJ, Ellebedy AH, Fremont DH
Cell Rep (2021) 37 pp. 109881-109881 [ DOI: doi:10.1016/j.celrep.2021.109881 Pubmed: 34655519 ]
- 2h04 light chain (11 kDa, Protein from Mus musculus)
- 2h04 heavy chain (13 kDa, Protein from Mus musculus)
- Complex of sars-cov-2 spike rbd with fab fragment of monoclonal antibody 2h04 (Complex)
- Fab fragment of monoclonal antibody 2h04 (Complex from Mus musculus)
- Sars-cov-2 spike rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
