Structure of KSHV glycoprotein B
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8y48
Q-score: 0.452
Fang XY, Sun C, Liu Z, Zeng MS
To Be Published
- Envelope glycoprotein b (73 kDa, Protein from Human herpesvirus 8 strain GK18)
- Glycoprotein b (Complex from Human gammaherpesvirus 8)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8z3w
Q-score: 0.297
To Be Published
- D614g spike protein (s) in complex with one ace2 (Complex)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8z4x
Q-score: 0.271
To Be Published
- D614g spike protein (s) in complex with two ace2s (Complex)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 8z64
Q-score: 0.415
To Be Published
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- D614g spike protein (s) in complex with three ace2s (focused on ntd-sd1-rbd-ace2) (Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8z7b
Q-score: 0.577
To Be Published
- Sars-cov-2 s trimer in the early fusion intermediate conformation (e-fic) (focused on ntd-sd1-rbd-ace2) (Complex)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8z7g
Q-score: 0.486
To Be Published
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s trimer in the early fusion intermediate conformation (e-fic) (focused on intact s2) (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 8z7l
Q-score: 0.56
To Be Published
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 s trimer in the early fusion intermediate conformation (e-fic) (focused on s-bottom) (Complex from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of SARS-CoV-2 S trimer in the early fusion intermediate conformation (E-FIC)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8z7p
Q-score: 0.234
To Be Published
- Sars-cov-2 s trimer in the early fusion intermediate conformation (e-fic) (Complex)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
Structure of Epstein-Barr virus major glycoprotein gp350 in complex with the receptor CR2
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 8zni
Q-score: 0.342
Sun C, Fang XY, Bu GL, Zhong LY, Xie C, Zhao GX, Sui SF, Liu Z, Zeng MS
Cell Rep (2025) 44 pp. 115168-115168 [ Pubmed: 39792550 DOI: doi:10.1016/j.celrep.2024.115168 ]
- Glycoprotein gp350 in complex with the receptor cr2 (Complex from Human gammaherpesvirus 4)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Bllf1 (90 kDa, Protein from human gammaherpesvirus 4)
- Complement receptor type 2 (106 kDa, Protein from Homo sapiens)
CryoEM structure of human XPR1 in complex with phosphate in state A
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9j51
Q-score: 0.468
Zhang W, Chen Y, Guan Z, Wang Y, Tang M, Du Z, Zhang J, Cheng M, Zuo J, Liu Y, Wang Q, Liu Y, Zhang D, Yin P, Ma L, Liu Z
Nat Commun (2025) 16 pp. 18-18 [ DOI: doi:10.1038/s41467-024-55471-9 Pubmed: 39747008 ]
- Phosphate ion (94 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Solute carrier family 53 member 1 (84 kDa, Protein from Homo sapiens)
- Human xpr1 (Complex from Homo sapiens)