Senktide bound to active human neurokinin 3 receptor in complex with Gq
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8jbf
Q-score: 0.524
Sun W, Yang F, Zhang H, Yuan Q, Ling S, Wang Y, Lv P, Li Z, Luo Y, Liu D, Yin W, Shi P, Xu HE, Tian C
Cell Discov (2023) 9 pp. 66-66 [ DOI: doi:10.1038/s41421-023-00564-w Pubmed: 37391393 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Rattus norvegicus)
- Senktide bound to active human neurokinin 3 receptor in complex with gq heterotrimer (Complex from Homo sapiens)
- Neuromedin-k receptor (44 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Bos taurus)
- Guanine nucleotide-binding protein gq subunit alpha (41 kDa, Protein from Homo sapiens)
- Scfv16 nanobody (32 kDa, Protein from Mus musculoides)
- Senktide (915 Da, Protein from Homo sapiens)
Neurokinin B bound to active human neurokinin 3 receptor in complex with Gq
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8jbg
Q-score: 0.569
Sun W, Yang F, Zhang H, Yuan Q, Ling S, Wang Y, Lv P, Li Z, Luo Y, Liu D, Yin W, Shi P, Xu HE, Tian C
Cell Discov (2023) 9 pp. 66-66 [ DOI: doi:10.1038/s41421-023-00564-w Pubmed: 37391393 ]
- Neurokinin-b (1 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Rattus norvegicus)
- Neuromedin-k receptor (nk3r-pfastbac1) (158 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Bos taurus)
- Scfv16 nanobody (32 kDa, Protein from Mus musculus)
- Guanine nucleotide-binding protein gq (g324) (41 kDa, Protein from Homo sapiens)
- Neurokinin b bound to active human neurokinin 3 receptor in complex with gq heterotrimer (Complex from Homo sapiens)
Substance P bound to active human neurokinin 3 receptor in complex with Gq
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8jbh
Q-score: 0.575
Sun W, Yang F, Zhang H, Yuan Q, Ling S, Wang Y, Lv P, Li Z, Luo Y, Liu D, Yin W, Shi P, Xu HE, Tian C
Cell Discov (2023) 9 pp. 66-66 [ DOI: doi:10.1038/s41421-023-00564-w Pubmed: 37391393 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Rattus norvegicus)
- Guanine nucleotide-binding protein gq subunit alpha (g324) (41 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Bos taurus)
- Peptide from protachykinin-1 (1 kDa, Protein from Homo sapiens)
- Substance p bound to active human neurokinin 3 receptor in complex with gq heterotrimer (Complex from Homo sapiens)
- Scfv16 nanobody (32 kDa, Protein from Mus musculoides)
- Nk3r-pfastbac1 (158 kDa, Protein from Homo sapiens)
respiratory syncytial virus nucleocapsid-like assembly
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8iuo
Q-score: 0.364
Wang Y, Zhang C, Luo Y, Ling X, Luo B, Jia G, Su D, Dong H, Su Z
Signal Transduct Target Ther (2023) 8 pp. 323-323 [ DOI: doi:10.1038/s41392-023-01602-5 Pubmed: 37607909 ]
- Rna (35-mer) (10 kDa, RNA from Homo sapiens)
- Respiratory syncytial virus nucleocapsid-like assembly (Complex from Human respiratory syncytial virus A)
- Nucleoprotein (40 kDa, Protein from Human respiratory syncytial virus A)
Neurokinin A bound to active human neurokinin 2 receptor in complex with G324
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7xwo
Q-score: 0.509
Sun W, Yuan Q, Zhang H, Yang F, Ling S, Luo Y, Lv P, Eric Xu H, Tian C, Yin W, Shi P
Cell Discov (2022) 8 pp. 72-72 [ DOI: doi:10.1038/s41421-022-00437-8 Pubmed: 35882833 ]
- Soluble cytochrome b562,substance-k receptor (57 kDa, Protein from Homo sapiens)
- The nka-bound neurokinin 2 receptor and gq heterotrimer complex (Complex from Homo sapien)
- Scfv (32 kDa, Protein from Rattus norvegicus)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Bos taurus)
- G324 (41 kDa, Protein from Homo sapiens)
- His-lys-thr-asp-ser-phe-val-gly-leu-met-nh2 (1 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Rattus norvegicus)
Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with two RsmA protein dimers
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7yr6
Q-score: 0.251
Jia X, Pan Z, Yuan Y, Luo B, Luo Y, Mukherjee S, Jia G, Liu L, Ling X, Yang X, Miao Z, Wei X, Bujnicki JM, Zhao K, Su Z
Cell Res (2023) 33 pp. 328-330 [ Pubmed: 36828938 DOI: doi:10.1038/s41422-023-00786-3 ]
- Rnp1-4 (Complex from Pseudomonas aeruginosa)
- Translational regulator csra (6 kDa, Protein from Pseudomonas aeruginosa)
- Rsmz rna (38 kDa, RNA from Pseudomonas aeruginosa)
Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with three RsmA protein dimers
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7yr7
Q-score: 0.292
Jia X, Pan Z, Yuan Y, Luo B, Luo Y, Mukherjee S, Jia G, Liu L, Ling X, Yang X, Miao Z, Wei X, Bujnicki JM, Zhao K, Su Z
Cell Res (2023) 33 pp. 328-330 [ Pubmed: 36828938 DOI: doi:10.1038/s41422-023-00786-3 ]
- Translational regulator csra (6 kDa, Protein from Pseudomonas aeruginosa)
- Rnp1-6 (Complex from Pseudomonas aeruginosa)
- Rsmz rna (118-mer) (38 kDa, RNA from Pseudomonas aeruginosa)
The Tet-S2 state of wild-type Tetrahymena group I intron with 30nt 3'/5'-exon
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 7xd5
Q-score: 0.504
Luo B, Zhang C, Ling X, Mukherjee S, Jia G, Xie J, Jia X, Liu L, Baulin EF, Luo Y, Jiang L, Dong H, Wei X, Bujnicki JM, Su Z
Nat Catal (2023) [ DOI: doi:10.1038/s41929-023-00934-3 ]
- The tet-s2 state molecule of co-transcriptional folded wild-type tetrahymena group i intron with 30nt 3'/5'-exon (5'-exon) (1 kDa, RNA from Tetrahymena thermophila)
- Magnesium ion (24 Da, Ligand)
- Co-transcriptional folded wild-type tetrahymena group i intron with 30nt 3'/5'-exon (Complex from Tetrahymena thermophila)
- The tet-s2 state molecule of co-transcriptional folded wild-type tetrahymena group i intron with 30nt 3'/5'-exon (intron and 3'-exon) (129 kDa, RNA from Tetrahymena thermophila)
- Spermidine (145 Da, Ligand)