Banach BB, Cerutti G, Fahad AS, Shen CH, Oliveira De Souza M, Katsamba PS, Tsybovsky Y, Wang P, Nair MS, Huang Y, Francino-Urdániz IM, Steiner PJ, Gutiérrez-González M, Liu L, López Acevedo SN, Nazzari AF, Wolfe JR, Luo Y, Olia AS, Teng IT, Yu J, Zhou T, Reddem ER, Bimela J, Pan X, Madan B, Laflin AD, Nimrania R, Yuen KY, Whitehead TA, Ho DD, Kwong PD, Shapiro L, DeKosky BJ
Cell Rep (2021) 37 [ DOI: 10.1016/j.celrep.2021.109771 Pubmed: 34587480 ]
Image sets:
Banach BB, Cerutti G, Fahad AS, Shen CH, Oliveira De Souza M, Katsamba PS, Tsybovsky Y, Wang P, Nair MS, Huang Y, Francino-Urdániz IM, Steiner PJ, Gutiérrez-González M, Liu L, López Acevedo SN, Nazzari AF, Wolfe JR, Luo Y, Olia AS, Teng IT, Yu J, Zhou T, Reddem ER, Bimela J, Pan X, Madan B, Laflin AD, Nimrania R, Yuen KY, Whitehead TA, Ho DD, Kwong PD, Shapiro L, DeKosky BJ
Cell Rep (2021) 37 [ DOI: 10.1016/j.celrep.2021.109771 Pubmed: 34587480 ]
Image sets:
Cryo-EM structure of SIDT1 in complex with phosphatidic acid
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 8jul
Q-score: 0.55
Sun CR, Xu D, Yang F, Hou Z, Luo Y, Zhang CY, Shan G, Huang G, Yao X, Chen Y, Li Q, Zhou CZ
Cell Res (2024) 34 pp. 84-87 [ DOI: doi:10.1038/s41422-023-00889-x Pubmed: 37932444 ]
- 1,2-dilauroyl-sn-glycero-3-phosphate (535 Da, Ligand)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Sid1 transmembrane family member 1 (93 kDa, Protein from Homo sapiens)
- Cryo-em structure of sidt1 in complex with phosphatidic acid (Complex from Homo sapiens)
Cryo-EM structure of SIDT1 E555Q mutant
Resolution: 2.38 Å
EM Method: Single-particle
Fitted PDBs: 8jun
Q-score: 0.574
Sun CR, Xu D, Yang F, Hou Z, Luo Y, Zhang CY, Shan G, Huang G, Yao X, Chen Y, Li Q, Zhou CZ
Cell Res (2024) 34 pp. 84-87 [ DOI: doi:10.1038/s41422-023-00889-x Pubmed: 37932444 ]
- Cryo-em structure of sidt1 e555q mutant (Complex from Homo sapiens)
- Sid1 transmembrane family member 1 (93 kDa, Protein from Homo sapiens)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Zinc ion (65 Da, Ligand)
The cryo-EM structure of the TwOSC1 tetramer
Resolution: 4.75 Å
EM Method: Single-particle
Fitted PDBs: 8j5z
Q-score: 0.305
Luo Y, Ma X, Qiu Y, Lu Y, Shen S, Li Y, Gao H, Chen K, Zhou J, Hu T, Tu L, Zhao H, Li D, Leng F, Gao W, Jiang T, Liu C, Huang L, Wu R, Tong Y
Angew Chem Int Ed Engl (2023) 62 pp. e202313429-e202313429 [ Pubmed: 37840440 DOI: doi:10.1002/anie.202313429 ]
- Terpene cyclase/mutase family member (88 kDa, Protein from Tripterygium wilfordii)
- Tetramer of twosc1 (Complex from Tripterygium wilfordii)
- Octyl beta-d-glucopyranoside (292 Da, Ligand)
Structure of PfNT1(Y190A)-GFP in complex with GSK4
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7ydq
Q-score: 0.31
Structure of PfENT1(Y190A) in complex with nanobody 19
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 7wn0
Q-score: 0.489
Wang C, Yu L, Zhang J, Zhou Y, Sun B, Xiao Q, Zhang M, Liu H, Li J, Li J, Luo Y, Xu J, Lian Z, Lin J, Wang X, Zhang P, Guo L, Ren R, Deng D
Nat Commun (2023) 14 pp. 1727-1727 [ DOI: doi:10.1038/s41467-023-37411-1 Pubmed: 36977719 ]
- Pfent1(y190a) in complex with nanobody 19 (Complex from Plasmodium falciparum)
- Equilibrative nucleoside/nucleobase transporter (47 kDa, Protein from Plasmodium falciparum)
- Nanobody19 (13 kDa, Protein from Vicugna pacos)
- Nanobody 19 (Complex)
- Pfent1 (Complex from Vicugna pacos)
Structure of PfNT1(Y190A) in complex with nanobody 48 and inosine
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 7wn1
Q-score: 0.545
Wang C, Yu L, Zhang J, Zhou Y, Sun B, Xiao Q, Zhang M, Liu H, Li J, Li J, Luo Y, Xu J, Lian Z, Lin J, Wang X, Zhang P, Guo L, Ren R, Deng D
Nat Commun (2023) 14 pp. 1727-1727 [ DOI: doi:10.1038/s41467-023-37411-1 Pubmed: 36977719 ]
- Inosine (268 Da, Ligand)
- Nanobody 48 (Complex)
- Equilibrative nucleoside/nucleobase transporter (47 kDa, Protein from Plasmodium falciparum)
- Structure of pfnt1(y190a) in complex with nanobody 48 and inosine (Complex from Plasmodium falciparum)
- Nanobody48 (13 kDa, Protein from Vicugna pacos)
- Pfnt1 (Complex from Vicugna pacos)
Cryo-EM structure of a eukaryotic ZnT8 in the presence of zinc
Resolution: 3.85 Å
EM Method: Single-particle
Fitted PDBs: 7y5g
Q-score: 0.438
Zhang S, Fu C, Luo Y, Xie Q, Xu T, Sun Z, Su Z, Zhou X
J Struct Biol (2022) 215 pp. 107926-107926 [ DOI: doi:10.1016/j.jsb.2022.107926 Pubmed: 36464198 ]
- Zinc transporter 8 (41 kDa, Protein from Xenopus tropicalis)
- Xtznt8 dimer complexed with zinc (Complex from Xenopus tropicalis)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a eukaryotic ZnT8 at a low pH
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 7y5h
Q-score: 0.442
Zhang S, Fu C, Luo Y, Xie Q, Xu T, Sun Z, Su Z, Zhou X
J Struct Biol (2022) 215 pp. 107926-107926 [ DOI: doi:10.1016/j.jsb.2022.107926 Pubmed: 36464198 ]
- Zinc transporter 8 (41 kDa, Protein from Xenopus tropicalis)
- Xtznt8 dimer complexed with zinc and proton (Complex from Xenopus tropicalis)
- Zinc ion (65 Da, Ligand)