Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 8k0e
Q-score: 0.407
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- A protein modification binary complex (Complex from Homo sapiens)
- Fe (iii) ion (55 Da, Ligand)
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its apo state
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 8k0f
Q-score: 0.512
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Peptidyl-prolyl cis-trans isomerase b (28 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- A protein modification ternary complex (Complex from Homo sapiens)
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- Fe (iii) ion (55 Da, Ligand)
Resolution: 3.62 Å
EM Method: Single-particle
Fitted PDBs: 8k0i
Q-score: 0.435
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Peptidyl-prolyl cis-trans isomerase b (28 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- A protein modification hexamer complex (Complex from Homo sapiens)
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 8k0m
Q-score: 0.531
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Peptidyl-prolyl cis-trans isomerase b (28 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- 2-oxoglutaric acid (146 Da, Ligand)
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
- Fe (iii) ion (55 Da, Ligand)
- A protein modification complex bound with co-substrate (Complex from Homo sapiens)
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 8k17
Q-score: 0.554
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Peptidyl-prolyl cis-trans isomerase b (28 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Synthetic substrate (1 kDa, Protein from Homo sapiens)
- A protein modification complex with synthetic substrate (Complex from Homo sapiens)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
- Fe (iii) ion (55 Da, Ligand)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8kc9
Q-score: 0.399
Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y
Nat Commun (2024) 15 pp. 7844-7844 [ DOI: doi:10.1038/s41467-024-52321-6 Pubmed: 39245686 ]
- Peptidyl-prolyl cis-trans isomerase b (28 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dsn-mle-mle-mva-bmt-aba-sar-mle-val-mle-ala (1 kDa, Protein from Tolypocladium inflatum)
- A protein modification complex bound with an inhibitor (Complex from Homo sapiens)
- Prolyl 3-hydroxylase 1 (83 kDa, Protein from Homo sapiens)
- Cartilage-associated protein (50 kDa, Protein from Homo sapiens)
- Fe (iii) ion (55 Da, Ligand)