EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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author:"Maeda Y"

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EMD-6844

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Cofilin decorated actin filament

Release date: May 23, 2018
Resolution: 3.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 5yu8
Q-score: 0.471

Tanaka K, Takeda S, Mitsuoka K, Oda T, Kimura-Sakiyama C, Maeda Y, Narita A

Nat Commun (2018) 9 pp. 1860-1860 [ Pubmed: 29749375 DOI: doi:10.1038/s41467-018-04290-w ]

Sample:

Adenosine-5'-diphosphate (427 Da, Ligand)
Cofilin-decorated actin filament (Complex from Gallus gallus)
Actin, alpha skeletal muscle (41 kDa, Protein from Gallus gallus)
Magnesium ion (24 Da, Ligand)
Cofilin-2 (18 kDa, Protein from Gallus gallus)

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EMD-2716

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Dynactin 3D structure: Implications for assembly and dynein binding

Release date: Aug. 13, 2014
Resolution: 34.0 Å
EM Method: Single-particle

Imai H, Narita A, Maeda Y, Schroer TA

J Mol Biol (2014) 426 pp. 3262-3271 [ DOI: doi:10.1016/j.jmb.2014.07.010 Pubmed: 25046383 ]

Sample:

P62 (Protein from Gallus gallus)
Arp11 (Protein from Gallus gallus)
P24 (Protein from Gallus gallus)
Arp1 (Protein from Gallus gallus)
P50/dynamitin (Protein from Gallus gallus)
Actin (Protein from Gallus gallus)
P25 (Protein from Gallus gallus)
P150glued (Protein from Gallus gallus)
P27 (Protein from Gallus gallus)
The dynactin complex (Sample)

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EMD-1872

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Actin filament pointed end

Release date: March 25, 2011
Resolution: 22.9 Å
EM Method: Single-particle
Fitted PDBs: 2y83
Q-score: 0.052

Narita A, Oda T, Maeda Y

EMBO J (2011) 30 pp. 1230-1237 [ Pubmed: 21378753 DOI: doi:10.1038/emboj.2011.48 ]

Sample:

EMD-1470

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Molecular structure of the ParM polymer and the mechanism leading to its nucleotide-driven dynamic instability

Release date: March 31, 2009
Resolution: 23.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 2zhc

Popp D, Narita A, Oda T, Fujisawa T, Matsuo H, Nitanai Y, Iwasa M, Maeda K, Onishi H, Maeda Y

EMBO J (2008) 27 pp. 570-579 [ DOI: doi:10.1038/sj.emboj.7601978 Pubmed: 18188150 ]

Sample:

Parm (Protein from Escherichia coli)
Parm filament (35 kDa, Sample)

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