FAdV-C4 AG234 Aviadenovirus structure, strain AG234
Perez-Illana MP, Schachnner A, Condezo GN, Hernando-Perez M, Martinez M, Marabini R, Hess M, San Martin C
To Be Published
FAdV-C4 AG234 Aviadenovirus structure, strain KR5
Perez-Illana MP, Schachnner A, Condezo GN, Hernando-Perez M, Martinez M, Marabini R, Hess M, San Martin C
To Be Published
- Penton protein (57 kDa, Protein from Fowl aviadenovirus C)
- Pre-hexon-linking protein viii (26 kDa, Protein from Fowl aviadenovirus C)
- Piiia (65 kDa, Protein from Fowl aviadenovirus C)
- Fowl aviadenovirus c (Virus from Fowl aviadenovirus C)
- Hexon protein (106 kDa, Protein from Fowl aviadenovirus C)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6yba
Q-score: 0.413
Perez-Illana M, Martinez M, Condezo GN, Hernando-Perez M, Mangroo C, Brown M, Marabini R, San Martin C
Sci Adv (2021) 7 [ DOI: doi:10.1126/sciadv.abd9421 Pubmed: 33627423 ]
- Pre-histone-like nucleoprotein (20 kDa, Protein from Human adenovirus F serotype 41)
- Pre-hexon-linking protein iiia (64 kDa, Protein from Human adenovirus F serotype 41)
- Human adenovirus 41 (Virus from Human adenovirus 41)
- Hexon protein (104 kDa, Protein from Human adenovirus F serotype 41)
- Pre-hexon-linking protein viii (25 kDa, Protein from Human adenovirus F serotype 41)
- Pre-protein vi (29 kDa, Protein from Human adenovirus F serotype 41)
- Hexon-interlacing protein (13 kDa, Protein from Human adenovirus F serotype 41)
- Penton protein (57 kDa, Protein from Human adenovirus F serotype 41)
Cryo electron microscopy of SARS-CoV-2 spike in prefusion state
Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 [ DOI: 10.1107/s2052252520012725 Pubmed: 33063791 ]
Image sets:
Cryo electron microscopy of SARS-CoV-2 stabilized spike in prefusion state
Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 [ DOI: 10.1107/s2052252520012725 Pubmed: 33063791 ]
Image sets:
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6qi5
Q-score: 0.5
Marabini R, Condezo GN, Krupovic M, Menendez-Conejero R, Gomez-Blanco J, San Martin C
Sci Adv (2021) 7 [ DOI: doi:10.1126/sciadv.abe6008 Pubmed: 33789897 ]
- Penton protein (50 kDa, Protein from Lizard adenovirus 2)
- Pre-hexon-linking protein viii (30 kDa, Protein from Lizard adenovirus 2)
- Piiia (67 kDa, Protein from Lizard adenovirus 2)
- Protein lh3 (41 kDa, Protein from Lizard adenovirus 2)
- Lizard adenovirus 2 (150 MDa, Virus from Lizard adenovirus 2)
- Hexon protein (101 kDa, Protein from Lizard adenovirus 2)
SARS-CoV-2 spike in prefusion state
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6zow
Q-score: 0.451
Melero R, Sorzano COS, Foster B, Vilas JL, Martinez M, Marabini R, Ramirez-Aportela E, Sanchez-Garcia R, Herreros D, Del Cano L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 pp. 1059-1069 [ DOI: doi:10.1107/S2052252520012725 Pubmed: 33063791 ]
- Water (18 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Alpha-d-mannopyranose (180 Da, Ligand)
- Spike homotrimer in prefusion state (Complex from Severe acute respiratory syndrome coronavirus 2)
- Dimethyl sulfoxide (78 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6zp5
Q-score: 0.417
Melero R, Sorzano COS, Foster B, Vilas JL, Martinez M, Marabini R, Ramirez-Aportela E, Sanchez-Garcia R, Herreros D, Del Cano L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 pp. 1059-1069 [ DOI: doi:10.1107/S2052252520012725 Pubmed: 33063791 ]
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike in prefusion state (flexibility analysis, 1-up closed conformation) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Alpha-d-mannopyranose (180 Da, Ligand)
- Dimethyl sulfoxide (78 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6zp7
Q-score: 0.368
Melero R, Sorzano COS, Foster B, Vilas JL, Martinez M, Marabini R, Ramirez-Aportela E, Sanchez-Garcia R, Herreros D, Del Cano L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 pp. 1059-1069 [ DOI: doi:10.1107/S2052252520012725 Pubmed: 33063791 ]
- Sars-cov-2 spike in prefusion state (flexibility analysis, 1-up open conformation) (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Alpha-d-mannopyranose (180 Da, Ligand)
- Dimethyl sulfoxide (78 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 stabilized spike in prefusion state (1-up conformation)
Melero R, Sorzano COS, Foster B, Vilas JL, Martinez M, Marabini R, Ramirez-Aportela E, Sanchez-Garcia R, Herreros D, Del Cano L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM
IUCrJ (2020) 7 pp. 1059-1069 [ DOI: doi:10.1107/S2052252520012725 Pubmed: 33063791 ]