Icosahedral reconstruction of bacteriophage phiCjT23 capsid
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7zzz
Q-score: 0.415
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Unknown vertex protein (443 Da, Protein from unidentified)
- Major capsid protein p5 (26 kDa, Protein from Flavobacterium phage)
- Unidentified (Virus from unidentified)
- Spike protein p13 n-terminal, capsid internal domain (10 kDa, Protein from Flavobacterium phage)
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 1
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8a01
Q-score: 0.568
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Major capsid protein p5 (26 kDa, Protein from Flavobacterium phage)
- Unidentified (Virus from unidentified)
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 2
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8a02
Q-score: 0.562
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Major capsid protein p5 (26 kDa, Protein from Flavobacterium phage)
- Unidentified (Virus from unidentified)
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 3
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8a03
Q-score: 0.54
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Major capsid protein p5 (26 kDa, Protein from Flavobacterium phage)
- Unidentified (Virus from unidentified)
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 4
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8a04
Q-score: 0.562
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Major capsid protein p5 (26 kDa, Protein from Flavobacterium phage)
- Unidentified (Virus from unidentified)
Localized reconstruction of bacteriophage phiCjT23 vertex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8a05
Q-score: 0.533
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Unknown vertex protein (443 Da, Protein from unidentified)
- Unidentified (Virus from unidentified)
- Spike protein p13 n-terminal, capsid internal domain (10 kDa, Protein from Flavobacterium phage)
Localized reconstruction of flavobacterium infecting lipid-containing phage FLiP vertex
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8a06
Q-score: 0.475
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
Nat Commun (2022) 13 pp. 7478-7478 [ Pubmed: 36463224 DOI: doi:10.1038/s41467-022-35123-6 ]
- Penton protein p12 (16 kDa, Protein from Flavobacterium phage FLiP)
- Flavobacterium phage flip (Virus from Flavobacterium phage FLiP)
Resolution: 42.2 Å
EM Method: Single-particle
Fitted PDBs: 6zig
Q-score: 0.028
Spinelli S, Tremblay D, Moineau S, Cambillau C, Goulet A
Viruses (2020) 12 [ Pubmed: 32796652 DOI: doi:10.3390/v12080878 ]
- Distal tail protein (34 kDa, Protein from Lactococcus phage p2)
- Receptor binding protein (28 kDa, Protein from Lactococcus phage p2)
- Lactococcus virus p2 (Virus from Lactococcus virus P2)
- Baseplate protein gp16 (42 kDa, Protein from Lactococcus phage p2)
Negative staining 3D reconstruction of p2 virion baseplate in activated conformation
Resolution: 28.7 Å
EM Method: Single-particle
Fitted PDBs: 6zih
Q-score: 0.033
Spinelli S, Tremblay D, Moineau S, Cambillau C, Goulet A
Viruses (2020) 12 [ Pubmed: 32796652 DOI: doi:10.3390/v12080878 ]
- Distal tail protein (34 kDa, Protein from Lactococcus phage p2)
- Receptor binding protein (28 kDa, Protein from Lactococcus phage p2)
- Lactococcus virus p2 (Virus from Lactococcus virus P2)
- Baseplate protein gp16 (42 kDa, Protein from Lactococcus phage p2)
Cryo-EM structure of St1Cas9-sgRNA-tDNA20-AcrIIA6 monomeric assembly.
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6rj9
Q-score: 0.542
Fuchsbauer O, Swuec P, Zimberger C, Amigues B, Levesque S, Agudelo D, Duringer A, Chaves-Sanjuan A, Spinelli S, Rousseau GM, Velimirovic M, Bolognesi M, Roussel A, Cambillau C, Moineau S, Doyon Y, Goulet A
Mol Cell (2019) 76 pp. 922- [ DOI: doi:10.1016/j.molcel.2019.09.012 Pubmed: 31604602 ]
- Crispr-associated endonuclease cas9 1 (129 kDa, Protein from Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9))
- Ntpam (Complex from Streptococcus virus 2972)
- Crispr-associated endonuclease cas9 (Complex from Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9))
- Acriia6 (21 kDa, Protein from Streptococcus phage D1811)
- Cryo-em structure of st1cas9-sgrna-tdna20-acriia6 monomeric assembly. (Complex)
- Sgrna (37 kDa, RNA from Streptococcus thermophilus)
- Acriia6 (Complex from Streptococcus phage D1811)
- Tdna20 (6 kDa, DNA from Streptococcus virus 2972)
- Sgrna (Complex from Streptococcus thermophilus)