CryoEM structure of a trehalose monomycolate transporter in lipid nanodiscs
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 7k8a
Q-score: 0.295
Su CC, Klenotic PA, Cui M, Lyu M, Morgan CE, Yu EW
PLoS Biol (2021) 19 pp. e3001370-e3001370 [ Pubmed: 34383749 DOI: doi:10.1371/journal.pbio.3001370 ]
CryoEM structure of a trehalose monomycolate transporter in lipid nanodiscs
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 7k8b
Q-score: 0.349
Su CC, Klenotic PA, Cui M, Lyu M, Morgan CE, Yu EW
PLoS Biol (2021) 19 pp. e3001370-e3001370 [ Pubmed: 34383749 DOI: doi:10.1371/journal.pbio.3001370 ]
CryoEM structure of a trehalose monomycolate transporter in lipid nanodiscs
Resolution: 4.27 Å
EM Method: Single-particle
Fitted PDBs: 7k8c
Q-score: 0.257
Su CC, Klenotic PA, Cui M, Lyu M, Morgan CE, Yu EW
PLoS Biol (2021) 19 pp. e3001370-e3001370 [ Pubmed: 34383749 DOI: doi:10.1371/journal.pbio.3001370 ]
CryoEM structure of a trehalose monomycolate transporter in TMM lipid nanodiscs (form II)
Resolution: 4.33 Å
EM Method: Single-particle
Fitted PDBs: 7k8d
Q-score: 0.14
Su CC, Klenotic PA, Cui M, Lyu M, Morgan CE, Yu EW
PLoS Biol (2021) 19 pp. e3001370-e3001370 [ Pubmed: 34383749 DOI: doi:10.1371/journal.pbio.3001370 ]
succinate-coenzyme Q reductase
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6wu6
Q-score: 0.353
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Succinate dehydrogenase flavoprotein subunit (64 kDa, Protein from Escherichia coli (strain SE11))
- Succinate-coenzyme q reductase complex (Complex from Escherichia coli)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Succinate dehydrogenase iron-sulfur subunit (26 kDa, Protein from Escherichia coli)
- Flavin-adenine dinucleotide (785 Da, Ligand)
- Succinate dehydrogenase (14 kDa, Protein from Escherichia coli)
- Succinate dehydrogenase hydrophobic membrane anchor subunit (12 kDa, Protein from Escherichia coli 908573)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
The Cryo-EM structure of the ubiquinol oxidase from Escherichia coli
Resolution: 2.38 Å
EM Method: Single-particle
Fitted PDBs: 6wti
Q-score: 0.591
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Ubiquinol oxidase subunit 2 (34 kDa, Protein from Escherichia coli)
- Cytochrome o ubiquinol oxidase, subunit iv (12 kDa, Protein from Escherichia coli)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Cytochrome o ubiquinol oxidase (22 kDa, Protein from Escherichia coli)
- Copper (ii) ion (63 Da, Ligand)
- Ubiquinone-8 (727 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Pentadecyl(tetradecyl)peroxyanhydride (524 Da, Ligand)
- Heme o (838 Da, Ligand)
- Ubiquinol oxidase (Complex from Escherichia coli)
- Cytochrome o ubiquinol oxidase, subunit i (74 kDa, Protein from Escherichia coli)
Cryo-EM structure of E. Coli OmpF
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 6wtz
Q-score: 0.54
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Water (18 Da, Ligand)
- Ompf (Complex from Escherichia coli K-12)
- Outer membrane porin f (39 kDa, Protein from Escherichia coli (strain K12))
Succinate: quinone oxidoreductase SQR from E.coli K12
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7jz2
Q-score: 0.51
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Succinate: quinone oxidoreductase sqr from e.coli k12 (Complex from Escherichia coli)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Succinate dehydrogenase iron-sulfur subunit (26 kDa, Protein from Escherichia coli)
- Ubiquinone-2 (318 Da, Ligand)
- Succinate dehydrogenase hydrophobic membrane anchor subunit (12 kDa, Protein from Escherichia coli)
- Fe3-s4 cluster (295 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Flavin-adenine dinucleotide (785 Da, Ligand)
- Succinate dehydrogenase flavoprotein subunit (64 kDa, Protein from Escherichia coli)
- Succinate dehydrogenase cytochrome b556 subunit (14 kDa, Protein from Escherichia coli)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
The Cryo-EM structure of the Catalase-peroxidase from Escherichia coli
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 7jz6
Q-score: 0.666
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Catalase-peroxidase (80 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- Katg (Complex from Escherichia coli)
- Protoporphyrin ix containing fe (616 Da, Ligand)
The Cryo-EM structure of the Glutamate decarboxylase from Escherichia coli
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 7jzh
Q-score: 0.467
Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW
Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]
- Glutamate decarboxylase (52 kDa, Protein from Escherichia coli)
- Glutamate decarboxylase (Complex from Escherichia coli)