Kalium channelrhodopsin 1 C110A mutant from Hyphochytrium catenoides, Dark State
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9cdc
Q-score: 0.465
Morizumi T, Kim K, Li H, Nag P, Dogon T, Sineshchekov OA, Wang Y, Brown LS, Hwang S, Sun H, Bondar AN, Schapiro I, Govorunova EG, Spudich JL, Ernst OP
Nat Commun (2025) 16 pp. 1283-1283 [ DOI: doi:10.1038/s41467-025-56491-9 Pubmed: 39900567 ]
- Water (18 Da, Ligand)
- Retinal (284 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Kalium channelrhodopsin 1 c110a (30 kDa, Protein from Hyphochytrium catenoides)
- Cholesterol (386 Da, Ligand)
- Kalium channelrhodopin 1 c110a reconstituted in peptidisc, dark state (91 MDa, Complex from Hyphochytrium catenoides)
Kalium channelrhodopsin 1 C110A mutant from Hyphochytrium catenoides, Laser-Flash-Illuminated
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9cdd
Q-score: 0.432
Morizumi T, Kim K, Li H, Nag P, Dogon T, Sineshchekov OA, Wang Y, Brown LS, Hwang S, Sun H, Bondar AN, Schapiro I, Govorunova EG, Spudich JL, Ernst OP
Nat Commun (2025) 16 pp. 1283-1283 [ DOI: doi:10.1038/s41467-025-56491-9 Pubmed: 39900567 ]
- Water (18 Da, Ligand)
- Retinal (284 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Kalium channelrhodopin 1 c110a reconstituted in peptidisc, laser-flash-illuminated (91 MDa, Complex from Hyphochytrium catenoides)
- Kalium channelrhodopsin 1 (30 kDa, Protein from Hyphochytrium catenoides)
- Cholesterol (386 Da, Ligand)
Kalium channelrhodopsin 1 C110A mutant from Hyphochytrium catenoides, Continuous Illumination State
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 9cde
Q-score: 0.395
Morizumi T, Kim K, Li H, Nag P, Dogon T, Sineshchekov OA, Wang Y, Brown LS, Hwang S, Sun H, Bondar AN, Schapiro I, Govorunova EG, Spudich JL, Ernst OP
Nat Commun (2025) 16 pp. 1283-1283 [ DOI: doi:10.1038/s41467-025-56491-9 Pubmed: 39900567 ]
- Water (18 Da, Ligand)
- Retinal (284 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Kalium channelrhodopin 1 c110a reconstituted in peptidisc, continuous illumination state (91 MDa, Complex from Hyphochytrium catenoides)
- Kalium channelrhodopsin 1 c110a - continuous illumination state (30 kDa, Protein from Hyphochytrium catenoides)
- Cholesterol (386 Da, Ligand)
SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8elj
Q-score: 0.343
Hermet P, Delache B, Herate C, Wolf E, Kivi G, Juronen E, Mumm K, Zusinaite E, Kainov D, Sankovski E, Virumae K, Planken A, Merits A, Besaw JE, Yee AW, Morizumi T, Kim K, Kuo A, Berriche A, Dereuddre-Bosquet N, Sconosciuti Q, Naninck T, Relouzat F, Cavarelli M, Ustav M, Wilson D, Ernst OP, Mannik A, LeGrand R, Ustav Jr M
PLoS Pathog (2023) 19 pp. e1011532-e1011532 [ DOI: doi:10.1371/journal.ppat.1011532 Pubmed: 37531329 ]
- Sars-cov-2 spike glycoprotein (Cellular component from Severe acute respiratory syndrome coronavirus 2)
- Ico-hu23 antibody fab light chain (22 kDa, Protein from Homo sapiens)
- Ico-hu23 antibody fab heavy chain (25 kDa, Protein from Homo sapiens)
- Ico-hu23 antibody fab fragment (Cellular component from Homo sapiens)
- Sars-cov-2 spike glycoprotein in complex with the ico-hu23 antibody fab fragment (Complex)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)