Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 7vq0
Q-score: 0.415
Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Watanabe T, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Sato K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A
Commun Biol (2022) 5 pp. 669-669 [ DOI: doi:10.1038/s42003-022-03630-3 Pubmed: 35794202 ]
- Neutralizing nanobody p86 (13 kDa, Protein from Vicugna pacos)
- Spike glycoprotein (138 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (2-up rbd) (Complex from Vicugna pacos)
- Neutralizing nanobodies p86 (Complex)
- Sars-cov-2 spike protein (2-up rbd) bound to neutralizing nanobodies p86 (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of the SARS-CoV-2 spike protein (3-up RBD) bound to neutralizing nanobodies P86
Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Watanabe T, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Sato K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A
Commun Biol (2022) 5 pp. 669-669 [ DOI: doi:10.1038/s42003-022-03630-3 Pubmed: 35794202 ]
- Spike glycoprotein (Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (3-up rbd) bound to neutralizing nanobodies p86 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Neutralizing nanobody p86 (Complex)
- Neutralizing nanobody p86 (Protein from Vicugna pacos)
- Sars-cov-2 spike protein (3-up rbd) (Complex from Vicugna pacos)
Cryo-EM structure of the SARS-CoV-2 spike protein (1-up RBD) bound to neutralizing nanobodies P17
Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Watanabe T, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Sato K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A
Commun Biol (2022) 5 pp. 669-669 [ DOI: doi:10.1038/s42003-022-03630-3 Pubmed: 35794202 ]
- Sars-cov-2 spike protein (1-up rbd) (Complex from Vicugna pacos)
- Neutralizing nanobody p17 (Protein from Vicugna pacos)
- Sars-cov-2 spike protein (1-up rbd) bound to neutralizing nanobodies p17 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Neutralizing nanobodies p17 (Complex)
- Spike glycoprotein (Protein from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P17
Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Watanabe T, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Sato K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A
Commun Biol (2022) 5 pp. 669-669 [ DOI: doi:10.1038/s42003-022-03630-3 Pubmed: 35794202 ]
- Sars-cov-2 spike protein (2-up rbd) (Complex from Vicugna pacos)
- Neutralizing nanobody p17 (Protein from Vicugna pacos)
- Neutralizing nanobodies p17 (Complex)
- Spike glycoprotein (Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (2-up rbd) bound to neutralizing nanobodies p17 (Complex from Severe acute respiratory syndrome coronavirus 2)