Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8f3c
Q-score: 0.419
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit beta' (158 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Rna (47-mer) (15 kDa, RNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Escherichia coli)
- Cryo-em consensus structure of escherichia coli que-pec (paused elongation complex) rna polymerase minus preq1 ligand (420 kDa, Complex from Escherichia coli)
- Dna (39-mer) (11 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit omega (11 kDa, Protein from Escherichia coli)
- Dna (38-mer) (12 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8g00
Q-score: 0.419
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit beta' (158 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Rna (47-mer) (15 kDa, RNA from Escherichia coli)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Cryo-em structure of 3dva component 0 of escherichia coli que-pec (paused elongation complex) rna polymerase minus preq1 ligand . (420 kDa, Complex from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit omega (10 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8g1s
Q-score: 0.389
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase subunit alpha, dna-directed rna polymerase subunit beta, dna-directed rna polymerase subunit beta', dna-directed rna polymerase subunit omega, dna (Complex from Escherichia coli)
- Rna (Complex from Bacillus subtilis)
- Rna (47-mer) (15 kDa, RNA from Bacillus subtilis)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit beta' (152 kDa, Protein from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Cryo-em structure of 3dva component 1 of escherichia coli que-pec (paused elongation complex) rna polymerase minus preq1 ligand (420 kDa, Complex)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8g2w
Q-score: 0.368
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Rna (47-mer) (15 kDa, RNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Cryo-em structure of 3dva component 2 of escherichia coli que-pec (paused elongation complex) rna polymerase minus preq1 ligand (420 kDa, Complex from Escherichia coli)
- Dna-directed rna polymerase subunit beta' (150 kDa, Protein from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit omega (8 kDa, Protein from Escherichia coli)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8g4w
Q-score: 0.338
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 7-deaza-7-aminomethyl-guanine (179 Da, Ligand)
- Rna (47-mer) (15 kDa, RNA from Escherichia coli)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Cryo-em consensus structure of escherichia coli que-pec (paused elongation complex) rna polymerase plus preq1 ligand (420 kDa, Complex from Escherichia coli)
- Dna-directed rna polymerase subunit beta' (150 kDa, Protein from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit omega (8 kDa, Protein from Escherichia coli)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8g7e
Q-score: 0.294
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Magnesium ion (24 Da, Ligand)
- 7-deaza-7-aminomethyl-guanine (179 Da, Ligand)
- Rna (47-mer) (15 kDa, RNA from Escherichia coli)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Cryo-em structure of 3dva component 0 of escherichia coli que-pec (paused elongation complex) rna polymerase plus preq1 ligand (420 kDa, Complex from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit beta' (158 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit omega (8 kDa, Protein from Escherichia coli)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8g8z
Q-score: 0.407
Chauvier A, Porta JC, Deb I, Ellinger E, Meze K, Frank AT, Ohi MD, Walter NG
Nat Struct Mol Biol (2023) 30 pp. 902-913 [ Pubmed: 37264140 DOI: doi:10.1038/s41594-023-01002-x ]
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 7-deaza-7-aminomethyl-guanine (179 Da, Ligand)
- Dna-directed rna polymerase subunit alpha (25 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit beta' (150 kDa, Protein from Escherichia coli)
- Dna (31-mer) (9 kDa, DNA from Escherichia coli)
- Dna (39-mer) (12 kDa, DNA from Escherichia coli)
- Rna (48-mer) (15 kDa, RNA from Escherichia coli)
- Cryo-em structure of 3dva component 1 of escherichia coli que-pec (paused elongation complex) rna polymerase plus preq1 ligand (420 kDa, Complex from Escherichia coli)
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Escherichia coli)