Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 6zdg
Q-score: 0.237
Zhou D, Duyvesteyn HME, Chen CP, Huang CG, Chen TH, Shih SR, Lin YC, Cheng CY, Cheng SH, Huang YC, Lin TY, Ma C, Huo J, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Donat RF, Godwin K, Buttigieg KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll MW, Gilbert-Jaramillo J, Knight ML, James W, Owens RJ, Naismith JH, Townsend AR, Fry EE, Zhao Y, Ren J, Stuart DI, Huang KA
Nat Struct Mol Biol (2020) 27 pp. 950-958 [ DOI: doi:10.1038/s41594-020-0480-y Pubmed: 32737466 ]
- Complex of sars-cov-2 spike ectodomain with ey6a fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 neutralizing antibody ey6a fab (Complex from human)
- Ey6a light chain (23 kDa, Protein from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ey6a heavy chain (24 kDa, Protein from Homo sapiens)
Association of two complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6zfo
Q-score: 0.191
Zhou D, Duyvesteyn HME, Chen CP, Huang CG, Chen TH, Shih SR, Lin YC, Cheng CY, Cheng SH, Huang YC, Lin TY, Ma C, Huo J, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Donat RF, Godwin K, Buttigieg KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll MW, Gilbert-Jaramillo J, Knight ML, James W, Owens RJ, Naismith JH, Townsend AR, Fry EE, Zhao Y, Ren J, Stuart DI, Huang KA
Nat Struct Mol Biol (2020) 27 pp. 950-958 [ DOI: doi:10.1038/s41594-020-0480-y Pubmed: 32737466 ]
- Complex of sars-cov-2 spike ectodomain with ey6a fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 neutralizing antibody ey6a fab (Complex from human)
- Ey6a light chain (23 kDa, Protein from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ey6a heavy chain (24 kDa, Protein from Homo sapiens)
Structure of the prefusion SARS-CoV-2 spike glycoprotein
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6z97
Q-score: 0.442
Huo J, Zhao Y, Ren J, Zhou D, Duyvesteyn HME, Ginn HM, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Coombes N, Bewley KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll M, Townsend A, Fry EE, Owens RJ, Stuart DI
Cell Host Microbe (2020) 28 pp. 445-454.e6 [ DOI: doi:10.1016/j.chom.2020.06.010 Pubmed: 32585135 ]
SARS-CoV-2 Spike glycoprotein in complex with a neutralizing antibody EY6A Fab
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6zdh
Q-score: 0.364
Zhou D, Duyvesteyn HME, Chen CP, Huang CG, Chen TH, Shih SR, Lin YC, Cheng CY, Cheng SH, Huang YC, Lin TY, Ma C, Huo J, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Donat RF, Godwin K, Buttigieg KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll MW, Gilbert-Jaramillo J, Knight ML, James W, Owens RJ, Naismith JH, Townsend AR, Fry EE, Zhao Y, Ren J, Stuart DI, Huang KA
Nat Struct Mol Biol (2020) 27 pp. 950-958 [ DOI: doi:10.1038/s41594-020-0480-y Pubmed: 32737466 ]
- Complex of sars-cov-2 spike glycoprotein with ey6a fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 neutralizing antibody ey6a fab (Complex from human)
- Ey6a light chain (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ey6a heavy chain (24 kDa, Protein from Homo sapiens)
Structure of the SARS-CoV-2 spike S1 protein in complex with CR3022 Fab
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6yor
Q-score: 0.224
Huo J, Zhao Y, Ren J, Zhou D, Duyvesteyn HME, Ginn HM, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Coombes N, Bewley KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll M, Townsend A, Fry EE, Owens RJ, Stuart DI
Cell Host Microbe (2020) 28 pp. 445-454.e6 [ DOI: doi:10.1016/j.chom.2020.06.010 Pubmed: 32585135 ]
- Spike glycoprotein (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Binary complex of sars-cov-2 spike s1 with cr3022 fab (Complex)
- Igg l chain (24 kDa, Protein from Homo sapiens)
- Igg h chain (24 kDa, Protein from Homo sapiens)
- Rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Immunoblobulin light chain (Complex from Homo sapiens)
- Immunoblobulin heavy chain (Complex from Homo sapiens)