Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8f2r
Q-score: 0.381
Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Yadav SKN, Ross J, Borucu U, Palmer CS, Chen KE, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ
Cell (2023) 186 pp. 2219-2237.e29 [ Pubmed: 37172566 DOI: doi:10.1016/j.cell.2023.04.003 ]
- Comm domain-containing protein 8 (20 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 5 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 2 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 4 (21 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 3 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 9 (21 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 10 (22 kDa, Protein from Homo sapiens)
- Human ccc complex (Complex from Homo sapiens)
- Comm domain-containing protein 6 (8 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 7 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 1 (20 kDa, Protein from Homo sapiens)
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 8f2u
Q-score: 0.408
Healy MD, McNally KE, Butkovic R, Chilton M, Kato K, Sacharz J, McConville C, Moody ERR, Shaw S, Planelles-Herrero VJ, Yadav SKN, Ross J, Borucu U, Palmer CS, Chen KE, Croll TI, Hall RJ, Caruana NJ, Ghai R, Nguyen THD, Heesom KJ, Saitoh S, Berger I, Schaffitzel C, Williams TA, Stroud DA, Derivery E, Collins BM, Cullen PJ
Cell (2023) 186 pp. 2219-2237.e29 [ Pubmed: 37172566 DOI: doi:10.1016/j.cell.2023.04.003 ]
- Comm domain-containing protein 10 (24 kDa, Protein from Homo sapiens)
- Coiled-coil domain-containing protein 93 (73 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 2 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 4 (21 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 8 (21 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 5 (28 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 6 (9 kDa, Protein from Homo sapiens)
- Coiled-coil domain-containing protein 22 (70 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 3 (22 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 9 (21 kDa, Protein from Homo sapiens)
- Human ccc complex (Complex from Homo sapiens)
- Comm domain-containing protein 1 (21 kDa, Protein from Homo sapiens)
- Comm domain-containing protein 7 (22 kDa, Protein from Homo sapiens)
D. melanogaster 13-protofilament microtubule
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7qup
Q-score: 0.46
Wagstaff JM, Planelles-Herrero VJ, Sharov G, Alnami A, Kozielski F, Derivery E, Lowe J
Sci Adv (2023) 9 pp. eadf3021-eadf3021 [ Pubmed: 36989372 DOI: doi:10.1126/sciadv.adf3021 ]
- Microtubule (1 MDa, Complex from Drosophila melanogaster)
- Tubulin beta-1 chain (47 kDa, Protein from Drosophila melanogaster)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1 chain (52 kDa, Protein from Drosophila melanogaster)
D. melanogaster alpha/beta tubulin heterodimer in the GDP form
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7quc
Q-score: 0.509
Wagstaff JM, Planelles-Herrero VJ, Sharov G, Alnami A, Kozielski F, Derivery E, Lowe J
Sci Adv (2023) 9 pp. eadf3021-eadf3021 [ Pubmed: 36989372 DOI: doi:10.1126/sciadv.adf3021 ]
- Tubulin alpha-1 chain (Complex from Drosophila melanogaster)
- Magnesium ion (24 Da, Ligand)
- Alpha1/beta tubulin heterodimer (Complex)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta-1 chain (Complex from Drosophila melanogaster)
- Tubulin alpha-1 chain (52 kDa, Protein from Drosophila melanogaster)
D. melanogaster alpha/beta tubulin heterodimer in the GTP form
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 7qud
Q-score: 0.46
Wagstaff JM, Planelles-Herrero VJ, Sharov G, Alnami A, Kozielski F, Derivery E, Lowe J
Sci Adv (2023) 9 pp. eadf3021-eadf3021 [ Pubmed: 36989372 DOI: doi:10.1126/sciadv.adf3021 ]
- Tubulin alpha-1 chain (Complex from Drosophila melanogaster)
- Magnesium ion (24 Da, Ligand)
- Alpha1/beta tubulin heterodimer (Complex)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta-1 chain (Complex from Drosophila melanogaster)
- Tubulin alpha-1 chain (52 kDa, Protein from Drosophila melanogaster)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7quq
Q-score: 0.427
Wagstaff JM, Planelles-Herrero VJ, Sharov G, Alnami A, Kozielski F, Derivery E, Lowe J
Sci Adv (2023) 9 pp. eadf3021-eadf3021 [ Pubmed: 36989372 DOI: doi:10.1126/sciadv.adf3021 ]
- Btubab heterodimer (Complex from Drosophila melanogaster)
- Tubulin beta (46 kDa, Protein from Prosthecobacter dejongeii)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Tubulin domain-containing protein (51 kDa, Protein from Prosthecobacter dejongeii)
TRAPPCore from the MiniTRAPPIII complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7b6x
Q-score: 0.345
Galindo A, Munro S, Planelles-Herrero VJ, Degliesposti G
To Be Published
- Trafficking protein particle complex subunit (20 kDa, Protein from Drosophila melanogaster)
- Geo08327p1 (17 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit 5 (22 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit (16 kDa, Protein from Drosophila melanogaster)
- Probable trafficking protein particle complex subunit 2 (16 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit (24 kDa, Protein from Drosophila melanogaster)
- Trappc2l (15 kDa, Protein from Drosophila melanogaster)
- Trapp core complex from the mini trappiii complex. (Complex from Drosophila melanogaster)
C8 region from the MiniTRAPPIII complex
Resolution: 5.7 Å
EM Method: Single-particle
Fitted PDBs: 7b6y
Q-score: 0.202
TRAPPC11 region from the MiniTRAPPIII complex
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 7b6z
Q-score: 0.289
Galindo A, Munro S, Planelles-Herrero VJ, Degliesposti G
To Be Published
Drosophila melanogaster TRAPPCore (C1, C2, C2L, C3a/b, C4, C5, C6 subunits)
Resolution: 4.27 Å
EM Method: Single-particle
Fitted PDBs: 7b6d
Q-score: 0.276
Galindo A, Planelles-Herrero VJ, Degliesposti G, Munro S
EMBO J (2021) 40 pp. e107608-e107608 [ DOI: doi:10.15252/embj.2020107608 Pubmed: 34018214 ]
- Geo08327p1 (17 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit (22 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit 5 (22 kDa, Protein from Drosophila melanogaster)
- Trappiii & trappii subcomplex: trappcore (Complex from Drosophila melanogaster)
- Trafficking protein particle complex subunit (16 kDa, Protein from Drosophila melanogaster)
- Probable trafficking protein particle complex subunit 2 (16 kDa, Protein from Drosophila melanogaster)
- Trafficking protein particle complex subunit (24 kDa, Protein from Drosophila melanogaster)
- Trappc2l (15 kDa, Protein from Drosophila melanogaster)