Cryo-EM structure of the hub of the 28 triskelia mini clathrin coat complex, class 15
Resolution: 10.5 Å
EM Method: Single-particle
Fitted PDBs: 7om8
Q-score: 0.022
Smith SM, Larocque G, Wood KM, Morris KL, Roseman AM, Sessions RB, Royle SJ, Smith CJ
EMBO J (2021) 40 pp. e108795-e108795 [ DOI: doi:10.15252/embj.2021108795 Pubmed: 34487371 ]
- Beta2 appendage domain of ap2 bound to terminal domains beneath the hub of the 28 triskelia mini clathrin coat complex, class 15 (Complex)
- Clathrin heavy chain (33 kDa, Protein from Sus scrofa)
- Clathrin heavy chain (Complex from Sus scrofa)
- Ap-2 complex subunit beta (26 kDa, Protein from Homo sapiens)
- Ap-2 complex subunit beta (Complex from Homo sapiens)
The structure of the dimeric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6z2j
Q-score: 0.314
Turnbull RE, Fairall L, Saleh A, Kelsall E, Morris KL, Ragan TJ, Savva CG, Chandru A, Millard CJ, Makarova OV, Smith CJ, Roseman AM, Fry AM, Cowley SM, Schwabe JWR
Nat Commun (2020) 11 pp. 3252-3252 [ DOI: doi:10.1038/s41467-020-17078-8 Pubmed: 32591534 ]
- Deoxynucleotidyltransferase terminal-interacting protein 1 (14 kDa, Protein from Homo sapiens)
- Histone deacetylase 1 (55 kDa, Protein from Homo sapiens)
- Inositol hexakisphosphate (660 Da, Ligand)
- Potassium ion (39 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Mitotic deacetylase-associated sant domain protein (19 kDa, Protein from Homo sapiens)
- Dimeric complex of the midac deacetylase complex containing hdac1, the elm2-sant domain of mideas and the dimerisation domain of dnttip1 (178 kDa, Complex from Homo sapiens)
The structure of the tetrameric HDAC1/MIDEAS/DNTTIP1 MiDAC deacetylase complex
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6z2k
Q-score: 0.206
Turnbull RE, Fairall L, Saleh A, Kelsall E, Morris KL, Ragan TJ, Savva CG, Chandru A, Millard CJ, Makarova OV, Smith CJ, Roseman AM, Fry AM, Cowley SM, Schwabe JWR
Nat Commun (2020) 11 pp. 3252-3252 [ DOI: doi:10.1038/s41467-020-17078-8 Pubmed: 32591534 ]
- Deoxynucleotidyltransferase terminal-interacting protein 1 (14 kDa, Protein from Homo sapiens)
- Histone deacetylase 1 (55 kDa, Protein from Homo sapiens)
- Potassium ion (39 Da, Ligand)
- Tetrameric complex of the midac deacetylase complex containing hdac1, the elm2-sant domain of mideas and the dimerisation domain of dnttip1 (357 kDa, Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Inositol hexakisphosphate (660 Da, Ligand)
- Mitotic deacetylase-associated sant domain protein (19 kDa, Protein from Homo sapiens)
eIF2B:eIF2 complex, phosphorylated on eIF2 alpha serine 52.
Resolution: 3.93 Å
EM Method: Single-particle
Fitted PDBs: 6i3m
Q-score: 0.307
Adomavicius T, Guaita M, Zhou Y, Jennings MD, Latif Z, Roseman AM, Pavitt GD
Nat Commun (2019) 10 pp. 2136-2136 [ Pubmed: 31086188 DOI: doi:10.1038/s41467-019-10167-3 ]
- Eukaryotic translation initiation factor 2 subunit alpha (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Translation initiation factor eif-2b subunit beta (42 kDa, Protein from Saccharomyces cerevisiae S288C)
- Eukaryotic translation initiation factor 2 subunit gamma (57 kDa, Protein from Saccharomyces cerevisiae S288C)
- Translation initiation factor eif-2b subunit delta (70 kDa, Protein from Saccharomyces cerevisiae S288C)
- Translation initiation factor eif-2b subunit gamma (65 kDa, Protein from Saccharomyces cerevisiae S288C)
- Translation initiation factor eif-2b subunit epsilon (81 kDa, Protein from Saccharomyces cerevisiae S288C)
- Complex of translation initiation factors eif2 and eif2b (838 kDa, Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Eukaryotic translation initiation factor 2 subunit beta (31 kDa, Protein from Saccharomyces cerevisiae S288C)
- Translation initiation factor eif-2b subunit alpha (34 kDa, Protein from Saccharomyces cerevisiae S288C)
Resolution: 4.61 Å
EM Method: Single-particle
Fitted PDBs: 6i7t
Q-score: 0.208
Adomavicius T, Guaita M, Zhou Y, Jennings MD, Latif Z, Roseman AM, Pavitt GD
Nat Commun (2019) 10 pp. 2136-2136 [ Pubmed: 31086188 DOI: doi:10.1038/s41467-019-10167-3 ]
- Translation initiation factor eif-2b subunit alpha (34 kDa, Protein from Saccharomyces cerevisiae)
- Translation initiation factor eif-2b subunit epsilon (81 kDa, Protein from Saccharomyces cerevisiae)
- Eukaryotic translation initiation factor 2 subunit beta (31 kDa, Protein from Saccharomyces cerevisiae)
- Complex of translation initiation factors eif2 and eif2b (838 kDa, Complex from Saccharomyces cerevisiae)
- Translation initiation factor eif-2b subunit delta (70 kDa, Protein from Saccharomyces cerevisiae)
- Translation initiation factor eif-2b subunit beta (42 kDa, Protein from Saccharomyces cerevisiae)
- Translation initiation factor eif-2b subunit gamma (65 kDa, Protein from Saccharomyces cerevisiae)
- Eukaryotic translation initiation factor 2 subunit gamma (57 kDa, Protein from Saccharomyces cerevisiae)
- Eukaryotic translation initiation factor 2 subunit alpha (34 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of SH1 full particle.
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6qt9
Q-score: 0.38
Colibus L, Roine E, Walter TS, Ilca SL, Wang X, Wang N, Roseman AM, Bamford D, Huiskonen JT, Stuart DI
Nat Commun (2019) 10 pp. 1456-1456 [ Pubmed: 30926810 DOI: doi:10.1038/s41467-019-09451-z ]
- Orf 24 (19 kDa, Protein from Haloarcula hispanica virus SH1)
- Orf 25 (25 kDa, Protein from Haloarcula hispanica virus SH1)
- Vp12 (2 kDa, Protein from Haloarcula hispanica virus SH1)
- Haloarcula hispanica virus sh1 (Virus from Haloarcula hispanica virus SH1)
- Orf 24 (18 kDa, Protein from Haloarcula hispanica virus SH1)
- Vp13 (6 kDa, Protein from Haloarcula hispanica virus SH1)
- Orf 31 (14 kDa, Protein from Haloarcula hispanica virus SH1)
- Orf 25 (24 kDa, Protein from Haloarcula hispanica virus SH1)
- Orf 24 (18 kDa, Protein from Haloarcula hispanica virus SH1)
ATP-bound states of GroEL captured by cryo-electron microscopy.
Resolution: 23.5 Å
EM Method: Single-particle
Fitted PDBs: 1gru
Q-score: 0.07
Ranson NA, Farr GW, Roseman AM, Gowen B, Fenton WA, Horwich AL, Saibil HR
Cell (2001) 107 pp. 869-879 [ Pubmed: 11779463 DOI: doi:10.1016/S0092-8674(01)00617-1 ]
- Groel (800 kDa, Protein from Escherichia coli)
- Groes-adp7-groel-atp7 from e.coli (1 MDa, Sample)
- Groes (70 kDa, Protein from Escherichia coli)
ATP-bound states of GroEL captured by cryo-electron microscopy.
Resolution: 14.9 Å
EM Method: Single-particle
Fitted PDBs: 2c7e
Q-score: 0.068
Ranson NA, Farr GW, Roseman AM, Gowen B, Fenton WA, Horwich AL, Saibil HR
Cell (2001) 107 pp. 869-879 [ Pubmed: 11779463 DOI: doi:10.1016/S0092-8674(01)00617-1 ]
- Groel (800 kDa, Protein from Escherichia coli)
- Groel-atp from e.coli (800 kDa, Sample)
ATP-bound states of GroEL captured by cryo-electron microscopy.
Resolution: 10.3 Å
EM Method: Single-particle
Fitted PDBs: 1gr5
Q-score: 0.114
Ranson NA, Farr GW, Roseman AM, Gowen B, Fenton WA, Horwich AL, Saibil HR
Cell (2001) 107 pp. 869-879 [ Pubmed: 11779463 ]
- Groel (800 kDa, Protein from Escherichia coli)
- Groel chaperonin, unliganded (800 kDa, Sample)