EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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author:"Shi D" AND natural_source_ncbi_code:"9031"

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EMD-8217

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MicroED structure of lysozyme at 1.8 A resolution

Release date: June 22, 2016
Resolution: 1.8 Å
EM Method: Electron Crystallography
Fitted PDBs: 5k7o
Q-score: 0.843

de la Cruz MJ, Hattne J, Shi D, Seidler P, Rodriguez J, Reyes FE, Sawaya MR, Cascio D, Weiss SC, Kim SK, Hinck CS, Hinck AP, Calero G, Eisenberg D, Gonen T

Nat Methods (2017) 14 pp. 399-402 [ Pubmed: 28192420 DOI: doi:10.1038/nmeth.4178 ]

Sample:

Water (18 Da, Ligand)
Lysozyme c (14 kDa, Protein from Gallus gallus)
Chloride ion (35 Da, Ligand)
Sodium ion (22 Da, Ligand)
Lysozyme (14 kDa, Cellular component from Gallus gallus)

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EMD-6342

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2.5A structure of lysozyme determined by MicroED with data from a single crystal

Release date: June 10, 2015
Resolution: 2.5 Å
EM Method: Electron Crystallography
Fitted PDBs: 5a3e
Q-score: 0.309

Nannenga BL, Shi D, Leslie AG, Gonen T

Nat Methods (2014) 11 pp. 927-930 [ DOI: doi:10.1038/nmeth.3043 Pubmed: 25086503 ]

Sample:

Lysozyme c (14 kDa, Protein from Gallus gallus)
Hen egg white lysozyme (14 kDa, Sample)

EMD-6313

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2.5A structure of lysozyme solved by MicroED

Release date: April 8, 2015
Resolution: 2.5 Å
EM Method: Electron Crystallography
Fitted PDBs: 3j6k
Q-score: 0.319

Nannenga BL, Shi D, Leslie AG, Gonen T

Nat Methods (2014) 11 pp. 927-930 [ DOI: doi:10.1038/nmeth.3043 Pubmed: 25086503 ]

Sample:

Lysozyme c (14 kDa, Protein from Gallus gallus)
Hen egg white lysozyme (14 kDa, Sample)

EMD-2945

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Structure of lysozyme solved by MicroED to 2.9 A

Release date: April 1, 2015
Resolution: 2.9 Å
EM Method: Electron Crystallography
Fitted PDBs: 3j4g
Q-score: 0.282

Shi D, Nannenga BL, Iadanza MG, Gonen T

eLife (2013) 2 pp. e01345- [ Pubmed: 24252878 DOI: doi:10.7554/eLife.01345 ]

Sample:

Lysozyme c (14 kDa, Protein from Gallus gallus)
Hen egg white lysozyme (14 kDa, Sample)

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EMDB [4]

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