Echovirus3 empty compacted particle
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7eai
Q-score: 0.488
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ Pubmed: 34035235 DOI: doi:10.1038/s41421-021-00264-3 ]
- Capsid protein vp3 (26 kDa, Protein from Echovirus E3)
- Capsid protein vp0 (36 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Echovirus e3 (Virus from Echovirus E3)
- Capsid protein vp1 (32 kDa, Protein from Echovirus E3)
Echovirus3 full particle in complex with 5G3 fab
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7eak
Q-score: 0.453
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ Pubmed: 34035235 DOI: doi:10.1038/s41421-021-00264-3 ]
- Capsid protein vp4 (7 kDa, Protein from Echovirus E3)
- Heavy chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- Capsid protein vp2 (29 kDa, Protein from Echovirus E3)
- Echovirus e3 in complex with 5g3 fab (Complex)
- Light chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- 5g3 fab (Complex from Mus musculus)
- Echovirus e3 (Complex from Echovirus E3)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Capsid protein vp1 (32 kDa, Protein from Echovirus E3)
- Myristic acid (228 Da, Ligand)
SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7cwl
Q-score: 0.257
Yao H, Sun Y, Deng YQ, Wang N, Tan Y, Zhang NN, Li XF, Kong C, Xu YP, Chen Q, Cao TS, Zhao H, Yan X, Cao L, Lv Z, Zhu D, Feng R, Wu N, Zhang W, Hu Y, Chen K, Zhang RR, Lv Q, Sun S, Zhou Y, Yan R, Yang G, Sun X, Liu C, Lu X, Cheng L, Qiu H, Huang XY, Weng T, Shi D, Jiang W, Shao J, Wang L, Zhang J, Jiang T, Lang G, Qin CF, Li L, Wang X
Cell Res (2021) 31 pp. 25-36 [ Pubmed: 33262452 DOI: doi:10.1038/s41422-020-00444-y ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab p17 heavy chain (13 kDa, Protein from Homo sapiens)
- Fab p17 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab p17 (Complex from Homo sapiens)
- Complex of sars-cov-2 spike protein and fab p17 with one rbd in closed state and two rbds in open state. (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7cwm
Q-score: 0.277
Yao H, Sun Y, Deng YQ, Wang N, Tan Y, Zhang NN, Li XF, Kong C, Xu YP, Chen Q, Cao TS, Zhao H, Yan X, Cao L, Lv Z, Zhu D, Feng R, Wu N, Zhang W, Hu Y, Chen K, Zhang RR, Lv Q, Sun S, Zhou Y, Yan R, Yang G, Sun X, Liu C, Lu X, Cheng L, Qiu H, Huang XY, Weng T, Shi D, Jiang W, Shao J, Wang L, Zhang J, Jiang T, Lang G, Qin CF, Li L, Wang X
Cell Res (2021) 31 pp. 25-36 [ Pubmed: 33262452 DOI: doi:10.1038/s41422-020-00444-y ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- The complex of sars-cov-2 spike protein and p17 with one rbd open and two rbds closed (Complex)
- P17 (Complex from Homo sapiens)
- Sars-cov-2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- P17 heavy chain (13 kDa, Protein from Homo sapiens)
- P17 light chain (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
P17-H014 Fab cocktail in complex with SARS-CoV-2 spike protein
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7cwn
Q-score: 0.224
Yao H, Sun Y, Deng YQ, Wang N, Tan Y, Zhang NN, Li XF, Kong C, Xu YP, Chen Q, Cao TS, Zhao H, Yan X, Cao L, Lv Z, Zhu D, Feng R, Wu N, Zhang W, Hu Y, Chen K, Zhang RR, Lv Q, Sun S, Zhou Y, Yan R, Yang G, Sun X, Liu C, Lu X, Cheng L, Qiu H, Huang XY, Weng T, Shi D, Jiang W, Shao J, Wang L, Zhang J, Jiang T, Lang G, Qin CF, Li L, Wang X
Cell Res (2021) 31 pp. 25-36 [ Pubmed: 33262452 DOI: doi:10.1038/s41422-020-00444-y ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- H014 and p17 fab cocktail in complex with sars-cov-2 spike protein (Complex)
- H014 fab (Complex from Homo sapiens)
- Sars-cov-2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- P17 fab (Complex from Homo sapiens)
- Heavy chain of h014 fab (22 kDa, Protein from Homo sapiens)
- Light chain of h014 fab (22 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of p17 fab (22 kDa, Protein from Homo sapiens)
- Light chain of p17 fab (22 kDa, Protein from Homo sapiens)