X-31 Hemagglutinin Precursor HA0 at pH 7.5
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7zj6
Q-score: 0.591
Garcia-Moro E, Zhang J, Calder LJ, Brown NR, Gamblin SJ, Skehel JJ, Rosenthal PB
PNAS (2022) 119 pp. e2208011119-e2208011119 [ DOI: doi:10.1073/pnas.2208011119 Pubmed: 35939703 ]
X-31 Hemagglutinin Precursor HA0 at pH 4.8
Resolution: 3.95 Å
EM Method: Single-particle
Fitted PDBs: 7zj7
Q-score: 0.352
Garcia-Moro E, Zhang J, Calder LJ, Brown NR, Gamblin SJ, Skehel JJ, Rosenthal PB
PNAS (2022) 119 pp. e2208011119-e2208011119 [ DOI: doi:10.1073/pnas.2208011119 Pubmed: 35939703 ]
X-31 Hemagglutinin Precursor HA0 at pH 7.5 after reneutralization
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7zj8
Q-score: 0.522
Garcia-Moro E, Zhang J, Calder LJ, Brown NR, Gamblin SJ, Skehel JJ, Rosenthal PB
PNAS (2022) 119 pp. e2208011119-e2208011119 [ DOI: doi:10.1073/pnas.2208011119 Pubmed: 35939703 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- X-31 hemagglutinin precursor (ha0) (Complex from Influenza A virus (A/Aichi/2/1968(H3N2)))
- Octyl beta-d-glucopyranoside (292 Da, Ligand)
- Hemagglutinin,fibritin (62 kDa, Protein from Tequatrovirus T4)
Single particle cryo EM dataset of SARS-CoV-2 Spike protein with D614G substitution
Benton DJ, Wrobel AG, Roustan C, Borg A, Xu P, Martin SR, Rosenthal PB, Skehel JJ, Gamblin SJ
Proc Natl Acad Sci U S A (2021) 118 [ DOI: 10.1073/pnas.2022586118 Pubmed: 33579792 ]
Image sets:
Closed conformation of D614G SARS-CoV-2 spike protein
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7bnm
Q-score: 0.396
Benton DJ, Wrobel AG, Roustan C, Borg A, Xu P, Martin SR, Rosenthal PB, Skehel JJ, Gamblin SJ
PNAS (2021) 118 [ Pubmed: 33579792 DOI: doi:10.1073/pnas.2022586118 ]
- Sars-cov-2 d614g spike (410 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (129 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Open conformation of D614G SARS-CoV-2 spike with 1 Erect RBD
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7bnn
Q-score: 0.438
Benton DJ, Wrobel AG, Roustan C, Borg A, Xu P, Martin SR, Rosenthal PB, Skehel JJ, Gamblin SJ
PNAS (2021) 118 [ Pubmed: 33579792 DOI: doi:10.1073/pnas.2022586118 ]
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 d614g spike (410 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Open conformation of D614G SARS-CoV-2 spike with 2 Erect RBDs
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7bno
Q-score: 0.295
Benton DJ, Wrobel AG, Roustan C, Borg A, Xu P, Martin SR, Rosenthal PB, Skehel JJ, Gamblin SJ
PNAS (2021) 118 [ Pubmed: 33579792 DOI: doi:10.1073/pnas.2022586118 ]
- Sars-cov-2 d614g spike (410 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (129 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Structure of Influenza Hemagglutinin ectodomain (A/duck/Alberta/35/76)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6hjn
Q-score: 0.509
Benton DJ, Nans A, Calder LJ, Turner J, Neu U, Lin YP, Ketelaars E, Kallewaard NL, Corti D, Lanzavecchia A, Gamblin SJ, Rosenthal PB, Skehel JJ
PNAS (2018) 115 pp. 10112-10117 [ Pubmed: 30224494 DOI: doi:10.1073/pnas.1810927115 ]
- Hemagglutinin (19 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- A/duck/alberta/35/76 hemagglutinin ectodomain (170 kDa, Complex from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Hemagglutinin (35 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Unknown branched fragment of phospholipid (478 Da, Ligand)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6hjp
Q-score: 0.486
Benton DJ, Nans A, Calder LJ, Turner J, Neu U, Lin YP, Ketelaars E, Kallewaard NL, Corti D, Lanzavecchia A, Gamblin SJ, Rosenthal PB, Skehel JJ
PNAS (2018) 115 pp. 10112-10117 [ Pubmed: 30224494 DOI: doi:10.1073/pnas.1810927115 ]
- Unknown branched fragment of phospholipid (478 Da, Ligand)
- Heavy chain of fisw84 fab fragment (22 kDa, Protein from Homo sapiens)
- Hemagglutinin (19 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- A/duck/alberta/35/76 haemagglutinin (Complex from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Hemagglutinin (35 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Light chain of fisw84 fab fragment (23 kDa, Protein from Homo sapiens)
- Fisw84 fab fragment (Complex from Homo sapiens)
- Complex of a/duck/alberta/35/76 haemagglutinin and fisw84 fab fragment (300 kDa, Complex)
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6hjq
Q-score: 0.376
Benton DJ, Nans A, Calder LJ, Turner J, Neu U, Lin YP, Ketelaars E, Kallewaard NL, Corti D, Lanzavecchia A, Gamblin SJ, Rosenthal PB, Skehel JJ
PNAS (2018) 115 pp. 10112-10117 [ Pubmed: 30224494 DOI: doi:10.1073/pnas.1810927115 ]
- Heavy chain of fisw84 fab (22 kDa, Protein from Homo sapiens)
- Light chain of fisw84 fab (23 kDa, Protein from Homo sapiens)
- Hemagglutinin (35 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Complex of full-length a/duck/alberta/35/76 hemagglutinin and fisw84 fab fragment (300 kDa, Complex)
- Fisw84 fab fragment (Complex from Homo sapiens)
- A/duck/alberta/35/76 hemagglutinin (Complex from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))
- Hemagglutinin (22 kDa, Protein from Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1))