Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7q4k
Q-score: 0.514
Fostier CR, Ousalem F, Leroy EC, Ngo S, Soufari H, Innis CA, Hashem Y, Boel G
Nat Commun (2023) 14 pp. 3891-3891 [ Pubmed: 37393329 DOI: doi:10.1038/s41467-023-39553-8 ]
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- Phe-trna (e site) (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli K-12)
- 16s rrna (497 kDa, RNA from Escherichia coli)
- Erythromycin-stalled escherichia coli 70s ribosome with streptococcal msrdl nascent chain (Complex)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- Erythromycin a (733 Da, Ligand)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- Msrdl mrna (2 kDa, RNA from Streptococcus pneumoniae)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- Msrdl: fme-tyr-leu-ile-phe-met (845 Da, Protein from Streptococcus pneumoniae)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- Met-trna (p site) (25 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
43S preinitiation complex from Leishmania tarentolae with kDDX60 helicase
Bochler A, Querido JB, Prilepskaja T, Soufari H, Simonetti A, Del Cistia ML, Kuhn L, Ribeiro AR, Valasek LS, Hashem Y
Cell Rep (2020) 33 pp. 108534-108534 [ Pubmed: 33357443 DOI: doi:10.1016/j.celrep.2020.108534 ]
Leishmania Major mitochondrial ribosome
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ane
Q-score: 0.321
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ml100 (146 kDa, Protein from Leishmania major)
- Ms61 (33 kDa, Protein from Leishmania major)
- Ms52 (75 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ms56 (43 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ms65 (30 kDa, Protein from Leishmania major)
- Rhodanese domain-containing protein (30 kDa, Protein from Leishmania major)
- Ms62 (27 kDa, Protein from Leishmania major)
- Ms58 (36 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ms55 (65 kDa, Protein from Leishmania major)
- Ms51 (94 kDa, Protein from Leishmania major)
- Ms34 (29 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (53 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (18 kDa, Protein from Leishmania major)
- Ms73 (11 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Excreted/secreted protein 15 (92 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Us8m (35 kDa, Protein from Leishmania major)
- Ms49 (133 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ms48 (199 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Magnesium ion (24 Da, Ligand)
- Ms53 (72 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Ubiquitin-like domain-containing protein (27 kDa, Protein from Leishmania major)
- Ms47 (131 kDa, Protein from Leishmania major)
- Ms63 (33 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Bl21m (20 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Us14m (19 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml38 (57 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ms35 (99 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Us15m (50 kDa, Protein from Leishmania major)
- Us3m (10 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Ms57 (45 kDa, Protein from Leishmania major)
- Ms59 (35 kDa, Protein from Leishmania major)
- Ms22 (73 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Leishmania major)
- Us9m (39 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml59/64 (28 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Ms29 (54 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Bs18m (37 kDa, Protein from Leishmania major)
- Us19m (19 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Bl20m (22 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Bs21m (22 kDa, Protein from Leishmania major)
- Ms33 (20 kDa, Protein from Leishmania major)
- Ul4m (49 kDa, Protein from Leishmania major)
- Ms50 (139 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Protein fyv4, mitochondrial (22 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Putative superoxide dismutase (30 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Bs6m (18 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Us11m (40 kDa, Protein from Leishmania major)
- Ms69 (16 kDa, Protein from Leishmania major)
- Ml52 (29 kDa, Protein from Leishmania major)
- Ms66 (44 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ms43 (51 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- 30s ribosomal protein s17-like protein (36 kDa, Protein from Leishmania major)
- Ms60 (35 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ms37 (24 kDa, Protein from Leishmania major)
- Us10m (92 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ms72 (19 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Akap7_nls domain-containing protein (31 kDa, Protein from Leishmania major)
- Large ribosomal rna (6 MDa, RNA from Leishmania major)
- Bs16m (22 kDa, Protein from Leishmania major)
- Ms26 (49 kDa, Protein from Leishmania major)
- Ms70 (21 kDa, Protein from Leishmania major)
- Ms23 (36 kDa, Protein from Leishmania major)
- Leishmania major mitochondrial riobosome (Complex from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Ms71 (19 kDa, Protein from Leishmania major)
The Large subunit of the Kinetoplastid mitochondrial ribosome
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7aih
Q-score: 0.479
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Ribosomal rna (2 MDa, RNA from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Ml52,ml52 (29 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ul4m (50 kDa, Protein from Leishmania major)
- Bl21m (21 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml54/69 (28 kDa, Protein from Leishmania major)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (19 kDa, Protein from Leishmania major)
- Bl20 (22 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Bl19m (16 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Ml38 (58 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
Intermediate assembly of the Large subunit from Leishmania major mitochondrial ribosome
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7am2
Q-score: 0.469
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ribosomal rna (6 MDa, RNA from Leishmania tarentolae)
- Ml71 (49 kDa, Protein from Leishmania tarentolae)
- Ml100 (146 kDa, Protein from Leishmania tarentolae)
- Ul30m (45 kDa, Protein from Leishmania tarentolae)
- Ml59/64 (28 kDa, Protein from Leishmania tarentolae)
- Ml74 (39 kDa, Protein from Leishmania tarentolae)
- Ml75 (39 kDa, Protein from Leishmania tarentolae)
- Rna uridylyltransferase (23 kDa, Protein from Leishmania tarentolae)
- Ml86 (21 kDa, Protein from Leishmania tarentolae)
- L0r8f8 (14 kDa, Protein from Leishmania tarentolae)
- U5 (6 kDa, Protein from Leishmania tarentolae)
- U1 (3 kDa, Protein from Leishmania tarentolae)
- Ml98 (13 kDa, Protein from Leishmania tarentolae)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania tarentolae)
- Ml84 (24 kDa, Protein from Leishmania tarentolae)
- Gtpase der (56 kDa, Protein from Leishmania tarentolae)
- Ua (14 kDa, Protein from Leishmania tarentolae)
- Ml53 (35 kDa, Protein from Leishmania tarentolae)
- Bl21m (21 kDa, Protein from Leishmania tarentolae)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ul4m (50 kDa, Protein from Leishmania tarentolae)
- Pseudouridylate synthase-like protein (47 kDa, Protein from Leishmania tarentolae)
- Ul24m (53 kDa, Protein from Leishmania tarentolae)
- Ml85 (27 kDa, Protein from Leishmania tarentolae)
- U6 (13 kDa, Protein from Leishmania tarentolae)
- Ml76 (38 kDa, Protein from Leishmania tarentolae)
- Ml41 (22 kDa, Protein from Leishmania tarentolae)
- R5 (1 kDa, RNA from Leishmania tarentolae)
- G domain-containing protein (86 kDa, Protein from Leishmania tarentolae)
- G domain-containing protein (51 kDa, Protein from Leishmania tarentolae)
- Bl19m (16 kDa, Protein from Leishmania tarentolae)
- Ml87 (22 kDa, Protein from Leishmania tarentolae)
- Ml68 (65 kDa, Protein from Leishmania tarentolae)
- Ml93 (18 kDa, Protein from Leishmania tarentolae)
- Ml88 (22 kDa, Protein from Leishmania tarentolae)
- R1 (896 Da, RNA from Leishmania tarentolae)
- Ul23m (28 kDa, Protein from Leishmania tarentolae)
- Dead/deah box helicase-like protein (87 kDa, Protein from Leishmania tarentolae)
- Bl35m (18 kDa, Protein from Leishmania tarentolae)
- Ml80 (27 kDa, Protein from Leishmania tarentolae)
- R2 (10 kDa, RNA from Leishmania tarentolae)
- Ml52,ml52 (29 kDa, Protein from Leishmania tarentolae)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania tarentolae)
- Bl32m (9 kDa, Protein from Leishmania tarentolae)
- Ml99 (13 kDa, Protein from Leishmania tarentolae)
- U4 (9 kDa, Protein from Leishmania tarentolae)
- Ml78 (3 kDa, Protein from Leishmania tarentolae)
- Bl28m (27 kDa, Protein from Leishmania tarentolae)
- U8 (4 kDa, Protein from Leishmania tarentolae)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania tarentolae)
- Ml95 (18 kDa, Protein from Leishmania tarentolae)
- Ml81 (37 kDa, Protein from Leishmania tarentolae)
- Ul29m (54 kDa, Protein from Leishmania tarentolae)
- Dnaj-like protein (45 kDa, Protein from Leishmania tarentolae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- U2 (2 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania tarentolae)
- Ul22m (32 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania tarentolae)
- Ml70 (50 kDa, Protein from Leishmania tarentolae)
- Ml72 (56 kDa, Protein from Leishmania tarentolae)
- U3 (5 kDa, Protein from Leishmania tarentolae)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania tarentolae)
- Ml94 (17 kDa, Protein from Leishmania tarentolae)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania tarentolae)
- Spou_methylase domain-containing protein (63 kDa, Protein from Leishmania tarentolae)
- Bl20m (22 kDa, Protein from Leishmania tarentolae)
- Ml67 (97 kDa, Protein from Leishmania tarentolae)
- Ml78 (33 kDa, Protein from Leishmania tarentolae)
- Acyl carrier protein (16 kDa, Protein from Leishmania tarentolae)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania tarentolae)
- Ml49 (26 kDa, Protein from Leishmania tarentolae)
- Ml89 (21 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania tarentolae)
- Trud domain-containing protein (68 kDa, Protein from Leishmania tarentolae)
- Ml42 (22 kDa, Protein from Leishmania tarentolae)
- Ml63 (18 kDa, Protein from Leishmania tarentolae)
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7aor
Q-score: 0.416
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ms56 (47 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms72 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms68 (27 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms60 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Murf5 (10 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Trafficking protein particle complex subunit (28 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us15m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms52 (81 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms62 (31 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms59 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms48 (206 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us11m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms66 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs16m (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms51 (95 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms37 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms38 (26 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs21m (23 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs6m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-if3 (42 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms61 (32 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Magnesium ion (24 Da, Ligand)
- Ms47 (134 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms53 (76 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms49 (136 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex)
- Rna (478-mer) (2 MDa, RNA from Trypanosoma cruzi (strain CL Brener))
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us19 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms65 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms58 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms29 (57 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs18m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms54 (77 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms70 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Akap7_nls domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms26 (51 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Protein fyv4, mitochondrial (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us9m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms69 (21 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms55 (67 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi)
- Zinc ion (65 Da, Ligand)
- Superoxide dismutase, putative (38 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms23 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms73 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms22 (73 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms57 (46 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Sod_fe_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi (strain CL Brener))
- Ribosome protein s12 (9 kDa, Protein from Trypanosoma cruzi)
- Ms50 (129 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Rhodanese domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms35 (99 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ms33 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us14m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms71 (25 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Uridine 5'-triphosphate (484 Da, Ligand)
- Us10m (94 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us8m (33 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- 30s ribosomal protein s17-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Ms63 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 7ase
Q-score: 0.314
Bochler A, Querido JB, Prilepskaja T, Soufari H, Simonetti A, Del Cistia ML, Kuhn L, Ribeiro AR, Valasek LS, Hashem Y
Cell Rep (2020) 33 pp. 108534-108534 [ Pubmed: 33357443 DOI: doi:10.1016/j.celrep.2020.108534 ]
- 40s ribosomal protein s15, putative (17 kDa, Protein from Trypanosoma cruzi)
- Csn8_psd8_eif3k domain-containing protein (22 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s33 (10 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s18, putative (17 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s12 (15 kDa, Protein from Trypanosoma cruzi)
- Putative 40s ribosomal protein s9 (22 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 (eif-3) interacting protein, putative (56 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s13, putative (17 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s5, putative (21 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 subunit e (46 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 subunit 7-like protein, putative (57 kDa, Protein from Trypanosoma cruzi)
- 60s ribosomal protein l40 (16 kDa, Protein from Trypanosoma cruzi)
- Putative 40s ribosomal protein s21 (27 kDa, Protein from Trypanosoma cruzi)
- Elongation initiation factor 2 alpha subunit, putative (47 kDa, Protein from Trypanosoma cruzi)
- Ribosomal protein s19, putative (18 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s15a, putative (16 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 subunit 8, putative (82 kDa, Protein from Trypanosoma cruzi)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 40s ribosomal protein s24 (15 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s3, putative (24 kDa, Protein from Trypanosoma cruzi)
- Magnesium ion (24 Da, Ligand)
- Protein translation factor sui1 homolog, putative (12 kDa, Protein from Trypanosoma cruzi)
- Kddx60 (246 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 2 subunit, putative (52 kDa, Protein from Trypanosoma cruzi)
- El41 (4 kDa, Protein from Trypanosoma cruzi)
- Eif3h (38 kDa, Protein from Trypanosoma cruzi)
- Initiator trna-met (24 kDa, RNA from Trypanosoma cruzi)
- 40s ribosomal protein s23, putative (15 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s27, putative (9 kDa, Protein from Trypanosoma cruzi)
- Ribosomal protein s20, putative (13 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s14, putative (15 kDa, Protein from Trypanosoma cruzi)
- 43s preinitiation complex from trypanosoma cruzi with the helicase kddx60 (Complex from Trypanosoma cruzi)
- Putative eukaryotic translation initiation factor 1a (18 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s26 (12 kDa, Protein from Trypanosoma cruzi)
- Ribosomal protein s29, putative (6 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 5, putative (42 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s3a-2 (29 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s11, putative (20 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s2, putative (28 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s8 (25 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein sa (27 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s4 (30 kDa, Protein from Trypanosoma cruzi)
- 18s (746 kDa, RNA from Trypanosoma cruzi)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s30 (7 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s10, putative (18 kDa, Protein from Trypanosoma cruzi)
- Eif3a (87 kDa, Protein from Trypanosoma cruzi)
- Translation initiation factor, putative (38 kDa, Protein from Trypanosoma cruzi)
- Jab_mpn domain-containing protein (38 kDa, Protein from Trypanosoma cruzi)
- Guanine nucleotide-binding protein subunit beta-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Rna-binding protein, putative (27 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s25 (12 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s6 (28 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s17, putative (16 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s7 (24 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s16, putative (16 kDa, Protein from Trypanosoma cruzi)